RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 FOXP1Q9H334 677 aaPredicted RBP6.86□□□□□ -1.31
MRPS28-203ENST00000518371 UNC45AQ9H3U1 944 aa6.86□□□□□ -1.31
MRPS28-203ENST00000518371 PRDM6Q9NQX0 595 aa6.86□□□□□ -1.31
MRPS28-203ENST00000518371 NOL7Q9UMY1 257 aaKnown RBP6.86□□□□□ -1.31
MRPS28-203ENST00000518371 KIAA1217Q5T5P2 1943 aa6.86□□□□□ -1.31
MRPS28-203ENST00000518371 IGKV6D-21A0A0A0MT36 114 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 RSPH10B2B2RC85 870 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 PSMD10O75832 226 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 PARNO95453 639 aaKnown RBP6.85□□□□□ -1.31
MRPS28-203ENST00000518371 PFKMP08237 780 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 RSPH10BP0C881 870 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 CKBP12277 381 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 ACTN1P12814 892 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 NID1P14543 1247 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 KLRC1P26715 233 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 MCM7P33993 719 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 RFC2P35250 354 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 ZNF174Q15697 407 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 CALCRLQ16602 461 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 ZNF484Q5JVG2 852 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 TMEM240Q5SV17 173 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 ZNF618Q5T7W0 954 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 IER5Q5VY09 327 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 LARP1BQ659C4 914 aaKnown RBP6.85□□□□□ -1.31
MRPS28-203ENST00000518371 TAF2Q6P1X5 1199 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 LRRC8DQ7L1W4 858 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 OTOP2Q7RTS6 562 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 NOSTRINQ8IVI9 506 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 CCDC60Q8IWA6 550 aaPredicted RBP6.85□□□□□ -1.31
MRPS28-203ENST00000518371 SLFN12Q8IYM2 578 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 RDM1Q8NG50 284 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 ETNPPLQ8TBG4 499 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 ATP8B4Q8TF62 1192 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 TRAPPC12Q8WVT3 735 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 FAM167AQ96KS9 214 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 FAM49AQ9H0Q0 323 aaPredicted RBP6.85□□□□□ -1.31
MRPS28-203ENST00000518371 TUBE1Q9UJT0 475 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 PCDHA12Q9UN75 941 aa6.85□□□□□ -1.31
MRPS28-203ENST00000518371 MYH7BA7E2Y1 1941 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 ALPK3Q96L96 1907 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.84□□□□□ -1.31
MRPS28-203ENST00000518371 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.84□□□□□ -1.31
MRPS28-203ENST00000518371 M0QZ92 97 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 NEMFO60524 1076 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 DKC1O60832 514 aaKnown RBP eCLIP6.84□□□□□ -1.31
MRPS28-203ENST00000518371 CTSHP09668 335 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 HOXC8P31273 242 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 ADAM17P78536 824 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 EPHA7Q15375 998 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 TRIM71Q2Q1W2 868 aaKnown RBP6.84□□□□□ -1.31
MRPS28-203ENST00000518371 LRIT3Q3SXY7 679 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 TTC38Q5R3I4 469 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 MARCH8Q5T0T0 291 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 NCAPH2Q6IBW4 605 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 MTHFD1LQ6UB35 978 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 RUFY4Q6ZNE9 571 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 HSCBQ8IWL3 235 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 DNAJB3Q8WWF6 145 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 HERVK_113Q902F9 699 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 HAS1Q92839 578 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 WNT8BQ93098 351 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 ZBTB10Q96DT7 871 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 TTC12Q9H892 705 aaPredicted RBP6.84□□□□□ -1.31
MRPS28-203ENST00000518371 KCNMB3Q9NPA1 279 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 KLK14Q9P0G3 267 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 CEP131Q9UPN4 1083 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 PCDHA2Q9Y5H9 948 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 SLC4A7Q9Y6M7 1214 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 CENPFP49454 3210 aa6.84□□□□□ -1.31
MRPS28-203ENST00000518371 SCN10AQ9Y5Y9 1956 aa6.84□□□□□ -1.32
MRPS28-203ENST00000518371 MBLAC1A4D2B0 266 aaPredicted RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 VPS37CA5D8V6 355 aaPredicted RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 KIF28PB7ZC32 967 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 TGFBR3LH3BV60 316 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 MAGEB2O15479 319 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 NBNO60934 754 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 CAND2O75155 1236 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 RPLP2P05387 115 aaKnown RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 P4HBP07237 508 aaKnown RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 HSP90AA1P07900 732 aaKnown RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 PDCP20941 246 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 U2AF2P26368 475 aaKnown RBP eCLIP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 QARSP47897 775 aaKnown RBP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 TRAPPC10P48553 1259 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 FXR1P51114 621 aaKnown RBP eCLIP6.83□□□□□ -1.32
MRPS28-203ENST00000518371 PSMC5P62195 406 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 PRKCEQ02156 737 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 RBL2Q08999 1139 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 TBC1D8BQ0IIM8 1120 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 PPP2R5CQ13362 524 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 FZD5Q13467 585 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 CUL4AQ13619 759 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 IKBKEQ14164 716 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 UGCGQ16739 394 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 XKR3Q5GH77 459 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 CNKSR3Q6P9H4 555 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 B3GNT9Q6UX72 402 aa6.83□□□□□ -1.32
MRPS28-203ENST00000518371 TPH2Q8IWU9 490 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms