RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TGFB3P10600 412 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CPA1P15085 419 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CASTP20810 708 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 PSMA5P28066 241 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 HSPA4P34932 840 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ERVK-24P63145 666 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CCNA1P78396 465 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 LACTBP83111 547 aaPredicted RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 MPP2Q14168 576 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 GFOD2Q3B7J2 385 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ADCK5Q3MIX3 580 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 LARP1BQ659C4 914 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 NXNQ6DKJ4 435 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 LVRNQ6Q4G3 990 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 BLOC1S2Q6QNY1 142 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 RASGRP2Q7LDG7 609 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 REC114Q7Z4M0 266 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CTU1Q7Z7A3 348 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 FAM160B2Q86V87 743 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 RAB11FIP4Q86YS3 637 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SULF2Q8IWU5 870 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 TPH2Q8IWU9 490 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CCDC144CPQ8IYA2 1237 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MB21D2Q8IYB1 491 aaPredicted RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 REXO1Q8N1G1 1221 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 MB21D1Q8N884 522 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 DCAF4Q8WV16 495 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PIBF1Q8WXW3 757 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 COA7Q96BR5 231 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ATG4CQ96DT6 458 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 TCEANC2Q96MN5 208 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 RHOBTB2Q9BYZ6 727 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 LACRTQ9GZZ8 138 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SMG9Q9H0W8 520 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 EHMT1Q9H9B1 1298 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 UPF2Q9HAU5 1272 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 TXNRD2Q9NNW7 524 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ACTR10Q9NZ32 417 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 BTBD7Q9P203 1132 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ZMYM5Q9UJ78 669 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PPP1R9AQ9ULJ8 1098 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SYNPO2Q9UMS6 1093 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 GTF2A1LQ9UNN4 478 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 FAM50BQ9Y247 325 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 POLR3KQ9Y2Y1 108 aaPredicted RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 RABGAP1Q9Y3P9 1069 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SNX14Q9Y5W7 946 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SLC12A7Q9Y666 1083 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 B2RBV5 119 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 KLRF2D3W0D1 207 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SH2B2O14492 632 aaPredicted RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 CNMDO75829 334 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 AGR2O95994 175 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 FAM153BP0C7A2 387 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PDHBP11177 359 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 EPHA1P21709 976 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MAPK4P31152 587 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MCM4P33991 863 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SOX5P35711 763 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ADH7P40394 386 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 HTR3AP46098 478 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 NOVP48745 357 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ANTXR2P58335 489 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SSRP1Q08945 709 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 ZNF543Q08ER8 600 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 TMEM132BQ14DG7 1078 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SEC23AQ15436 765 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PKN2Q16513 984 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 FAM110CQ1W6H9 321 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 GPATCH4Q5T3I0 446 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 SYDE2Q5VT97 1194 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SNRNP48Q6IEG0 339 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 LLGL2Q6P1M3 1020 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 C16orf54Q6UWD8 224 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 LBX2Q6XYB7 198 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 Q6ZUG5 572 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CHSY3Q70JA7 882 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 OTOP1Q7RTM1 612 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PLEKHH3Q7Z736 793 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PPHLN1Q8NEY8 458 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 PJA1Q8NG27 643 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CTCFLQ8NI51 663 aaPredicted RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 RAET1EQ8TD07 263 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 IGDCC4Q8TDY8 1250 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PARD3BQ8TEW8 1205 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 TTC9Q92623 222 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 ANKS1AQ92625 1134 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SKA1Q96BD8 255 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MPP4Q96JB8 637 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 TMEM87BQ96K49 555 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MYL10Q9BUA6 226 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SARGQ9BW04 601 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MOV10L1Q9BXT6 1211 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 SPATC1LQ9H0A9 340 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CPVLQ9H3G5 476 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 LY9Q9HBG7 655 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 RAVER2Q9HCJ3 691 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 PDRG1Q9NUG6 133 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 MORF4L1Q9UBU8 362 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 CYP46A1Q9Y6A2 500 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms