RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PPCSQ9HAB8 311 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 BCAP29Q9UHQ4 241 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 AFDNP55196 1824 aaKnown RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L10C9JJH3 530 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 INHBAP08476 426 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TRIM49P0CI25 452 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TRIM49CP0CI26 452 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 MYBP10242 640 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 COMTP21964 271 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 MARK3P27448 753 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CTCFP49711 727 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 HSP90AA5PQ58FG0 334 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TRAPPC3LQ5T215 181 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 WLSQ5T9L3 541 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 KAZNQ674X7 775 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 HGSNATQ68CP4 663 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 SLC13A5Q86YT5 568 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 EXOC8Q8IYI6 725 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 PIGOQ8TEQ8 1089 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 DCAF4Q8WV16 495 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CCT6BQ92526 530 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 C18orf8Q96DM3 657 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TRABDQ9H4I3 376 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 WHRNQ9P202 907 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 KCNG1Q9UIX4 513 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 L3MBTL1Q9Y468 752 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 UBE4BO95155 1302 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 LTN1O94822 1766 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 A0A0G2JND7 137 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 OPLAHO14841 1288 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 RIPK2O43353 540 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CAMTA2O94983 1202 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 ALDH5A1P51649 535 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 IGBP1P78318 339 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 IZUMO3Q5VZ72 239 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TMEM154Q6P9G4 183 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CTAGE3PQ8IX95 158 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 SMC1BQ8NDV3 1235 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 OSBPL7Q9BZF2 842 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 SEMA4AQ9H3S1 761 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 PPP1R9AQ9ULJ8 1098 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 MRPL11Q9Y3B7 192 aaKnown RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 C5orf60A6NFR6 353 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 EIF4E1BA6NMX2 242 aaKnown RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 SGK1O00141 431 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CREB3O43889 395 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 MGRN1O60291 552 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 SNX3O60493 162 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CCDC22O60826 627 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 VAMP7P51809 220 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 DRG2P55039 364 aaKnown RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 IFI35P80217 286 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TRADDQ15628 312 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 PDCD2Q16342 344 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 XXYLT1Q8NBI6 393 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 NKX2-3Q8TAU0 364 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TEKT1Q969V4 418 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 THAP2Q9H0W7 228 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 MTMR4Q9NYA4 1195 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TXNDC16Q9P2K2 825 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 IQANK1A0A1B0GTG1 560 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 DNM1LO00429 736 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 MYBL1P10243 752 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TNNI1P19237 187 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SLC1A1P43005 524 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 GCLMP48507 274 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ARFIP2P53365 341 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF543Q08ER8 600 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 KYNUQ16719 465 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 C11orf63Q6NUN7 778 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 GJB7Q6PEY0 223 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 APBB1IPQ7Z5R6 666 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 AGAP11Q8TF27 550 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 MTMR9Q96QG7 549 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF577Q9BSK1 485 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 GANQ9H2C0 597 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SALL4Q9UJQ4 1053 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TRAF3IP3Q9Y228 551 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SETD1AO15047 1707 aaKnown RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 WDR91A4D1P6 747 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SPAG7O75391 227 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TJP3O95049 919 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 KRT1P04264 644 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 RPA1P27694 616 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 VHLP40337 213 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 MMP13P45452 471 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 RCN2Q14257 317 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 NPY5RQ15761 445 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 HADHQ16836 314 aaKnown RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 KLHL38Q2WGJ6 581 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 NBPF20Q3BBV1 942 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 FAM102BQ5T8I3 360 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 EMC10Q5UCC4 262 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 KSR1Q8IVT5 923 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 PYROXD1Q8WU10 500 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 CHURC1Q8WUH1 139 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 RBM41Q96IZ5 413 aaKnown RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 OLFM3Q96PB7 478 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms