RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 KIAA0319Q5VV43 1072 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ARL6IP4Q66PJ3 421 aaKnown RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GDF6Q6KF10 455 aaPredicted RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 B3GNT9Q6UX72 402 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ERMP1Q7Z2K6 904 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 C7orf61Q8IZ16 206 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ERMNQ8TAM6 284 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 AFAP1L1Q8TED9 768 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ATP8B4Q8TF62 1192 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ATP6V0A1Q93050 837 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 DYDC2Q96IM9 177 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 EIF2AK1Q9BQI3 630 aaKnown RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 FTOQ9C0B1 505 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZSWIM4Q9H7M6 989 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CUEDC1Q9NWM3 386 aaPredicted RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 LRWD1Q9UFC0 647 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CFAP45Q9UL16 551 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZMYND8Q9ULU4 1186 aaPredicted RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZDHHC9Q9Y397 364 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 MROH7Q68CQ1 1323 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 EMSYQ7Z589 1322 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RRN3P2A6NIE6 340 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZNF862O60290 1169 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 B4GALT4O60513 344 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SLITRK3O94933 977 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CLTBP09497 229 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CYP2C9P11712 490 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 BMP1P13497 986 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 EDN3P14138 238 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SYN1P17600 705 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TARSP26639 723 aaKnown RBP6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CDC25AP30304 524 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CCT6AP40227 531 aaKnown RBP6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PRPHP41219 470 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SPIRE1Q08AE8 756 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 FAAP100Q0VG06 881 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SFSWAPQ12872 951 aaKnown RBP6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PAK2Q13177 524 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SNX17Q15036 470 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SLC39A14Q15043 492 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PTPAQ15257 358 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GRIK4Q16099 956 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 UGCGQ16739 394 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 MTERF2Q49AM1 385 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 XKR3Q5GH77 459 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 EFHC2Q5JST6 749 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZNF484Q5JVG2 852 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 KRT79Q5XKE5 535 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 OTUD6AQ7L8S5 288 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ANKRD33Q7Z3H0 272 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SESTD1Q86VW0 696 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CATSPER3Q86XQ3 398 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 FAM126BQ8IXS8 530 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GLIS3Q8NEA6 775 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RASSF8Q8NHQ8 419 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TRAPPC12Q8WVT3 735 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 FAM167AQ96KS9 214 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 IPO9Q96P70 1041 aaKnown RBP6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 HSD17B14Q9BPX1 270 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SH2D3AQ9BRG2 576 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 LXNQ9BS40 222 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GSX2Q9BZM3 304 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SUGCTQ9HAC7 445 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GTF2IRD1Q9UHL9 959 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NRCAMQ92823 1304 aa6.47□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CUL9Q8IWT3 2517 aa6.46□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TNRC18O15417 2968 aaPredicted RBP6.46□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TMEM150BA6NC51 233 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TRIM43BA6NCK2 446 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LRRC37A2A6NM11 1700 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PP2D1A8MPX8 630 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SPTLC2O15270 562 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MMP20O60882 483 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MED24O75448 989 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CD4P01730 458 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SPATA31C1P0DKV0 1188 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RAG1P15918 1043 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KLRC1P26715 233 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 YWHABP31946 246 aaKnown RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 THPOP40225 353 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 UBA7P41226 1012 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NASPP49321 788 aaPredicted RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KRT85P78386 507 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PRKCEQ02156 737 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 GRIN1Q05586 938 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RBL2Q08999 1139 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCINQ13939 588 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 XKR9Q5GH70 373 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SPECC1Q5M775 1068 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PEAR1Q5VY43 1037 aaPredicted RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 HAUS3Q68CZ6 603 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PLA2G4FQ68DD2 849 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ATL3Q6DD88 541 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MTHFD1LQ6UB35 978 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 C4orf19Q8IY42 314 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 METTL13Q8N6R0 699 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms