RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 SPON1Q9HCB6 807 aa0.8□□□□□ -2.28
RNU6-557P-201ENST00000516842 PPT2Q9UMR5 302 aa0.8□□□□□ -2.28
RNU6-557P-201ENST00000516842 FPGT-TNNI3KV9GXZ4 949 aa0.8□□□□□ -2.28
RNU6-557P-201ENST00000516842 PRAMEF25A6NGN4 478 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 KRTAP4-16G5E9R7 235 aaPredicted RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 NOP56O00567 594 aaKnown RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 KCNK3O14649 394 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 SLC28A2O43868 658 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 JUNP05412 331 aaKnown RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 MMEP08473 750 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 NHLRC4P0CG21 123 aaPredicted RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 HNRNPLP14866 589 aaKnown RBP eCLIP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 CDKN2AP42771 156 aaKnown RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 IRF9Q00978 393 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 E2F1Q01094 437 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 SPIRE1Q08AE8 756 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 SEC23AQ15436 765 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 METRNLQ641Q3 311 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 KIAA1211LQ6NV74 962 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 POMZP3Q6PJE2 187 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 ERMP1Q7Z2K6 904 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 GLB1L3Q8NCI6 653 aaPredicted RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 DDX17Q92841 729 aaKnown RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 GFM2Q969S9 779 aaKnown RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 FUBP1Q96AE4 644 aaKnown RBP0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 ACSS2Q9NR19 701 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 GJB4Q9NTQ9 266 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 ST3GAL5Q9UNP4 418 aa0.79□□□□□ -2.28
RNU6-557P-201ENST00000516842 SMIM35A0A1B0GVV1 85 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 PRAMEF22A3QJZ6 481 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 ANKRD34BA5PLL1 514 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 BAG4O95429 457 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 C4BPAP04003 597 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 CFIP05156 583 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 T-ENOLP0DO92 83 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 TCEA1P23193 301 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 GRK2P25098 689 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 GRK3P35626 688 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 CASRP41180 1078 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 MAPK10P53779 464 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 RAB33AQ14088 237 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 NPY5RQ15761 445 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 TRIM71Q2Q1W2 868 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 FAM102AQ5T9C2 384 aaPredicted RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 B3GNTL1Q67FW5 361 aaPredicted RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 PEG10Q86TG7 708 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 FAM83AQ86UY5 434 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 CNGA4Q8IV77 575 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 SYNPOQ8N3V7 929 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 ZBTB38Q8NAP3 1195 aaPredicted RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 OR10H5Q8NGA6 315 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 CCDC97Q96F63 343 aaPredicted RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 C1orf159Q96HA4 380 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 ZNF414Q96IQ9 312 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 ASB16Q96NS5 453 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 FERD3LQ96RJ6 166 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 TMEM79Q9BSE2 394 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 SEMA4CQ9C0C4 833 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 PRSS22Q9GZN4 317 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 TRMT13Q9NUP7 481 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 TRNAU1APQ9NX07 287 aaKnown RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 SAE1Q9UBE0 346 aaPredicted RBP0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 SERGEFQ9UGK8 458 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 PARP2Q9UGN5 583 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 DNAI1Q9UI46 699 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 HDAC5Q9UQL6 1122 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 NUB1Q9Y5A7 615 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 NPFFR2Q9Y5X5 522 aa0.78□□□□□ -2.28
RNU6-557P-201ENST00000516842 RTL8CO15255 209 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 TBX6O95947 436 aaPredicted RBP0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 SCG5P05408 212 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 PRG2P13727 222 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 CERS1P27544 350 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 HOXC12P31275 282 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 SESN2P58004 480 aaPredicted RBP0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 MAP3K12Q12852 859 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 METTL24Q5JXM2 366 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 ANKS6Q68DC2 871 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 SH2D6Q7Z4S9 175 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 RASAL3Q86YV0 1011 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 MSL3Q8N5Y2 521 aaKnown RBP0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 RNF169Q8NCN4 708 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 RNF31Q96EP0 1072 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 PTCD3Q96EY7 689 aaKnown RBP0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 APBA2Q99767 749 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 ZSWIM1Q9BR11 485 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 PDCD2LQ9BRP1 358 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 ZPBPQ9BS86 351 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 ENKD1Q9H0I2 346 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 TBCCD1Q9NVR7 557 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 ING3Q9NXR8 418 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 KCTD5Q9NXV2 234 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 SRPK3Q9UPE1 567 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 PCDHAC2Q9Y5I4 1007 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 KIF26BQ2KJY2 2108 aa0.77□□□□□ -2.29
RNU6-557P-201ENST00000516842 IGKV6D-41A0A0C4DH26 115 aa0.76□□□□□ -2.29
RNU6-557P-201ENST00000516842 A0A1W2PQH9 124 aa0.76□□□□□ -2.29
RNU6-557P-201ENST00000516842 CCDC78A2IDD5 438 aa0.76□□□□□ -2.29
RNU6-557P-201ENST00000516842 TISP43B9A030 160 aa0.76□□□□□ -2.29
RNU6-557P-201ENST00000516842 OAZ2O95190 189 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms