RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 POSTNQ15063 836 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 DCAF4L1Q3SXM0 396 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
SNF8-215ENST00000515572 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 FAM109BQ6ICB4 259 aaPredicted RBP13.07□□□□□ -0.32
SNF8-215ENST00000515572 TAS1R3Q7RTX0 852 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 ZNF598Q86UK7 904 aaKnown RBP13.07□□□□□ -0.32
SNF8-215ENST00000515572 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 ACO2Q99798 780 aaKnown RBP13.07□□□□□ -0.32
SNF8-215ENST00000515572 TRIM6Q9C030 488 aaPredicted RBP13.07□□□□□ -0.32
SNF8-215ENST00000515572 PDZD7Q9H5P4 517 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
SNF8-215ENST00000515572 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 DGKIO75912 1065 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 GCNT3O95395 438 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 CASP1P29466 404 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 EHHADHQ08426 723 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 DPYDQ12882 1025 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 PSMD2Q13200 908 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 FAM117BQ6P1L5 589 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 TMCO2Q7Z6W1 182 aaPredicted RBP13.06□□□□□ -0.32
SNF8-215ENST00000515572 MRPL10Q7Z7H8 261 aaKnown RBP13.06□□□□□ -0.32
SNF8-215ENST00000515572 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 BICD1Q96G01 975 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 TARS2Q9BW92 718 aaKnown RBP13.06□□□□□ -0.32
SNF8-215ENST00000515572 STRA6Q9BX79 667 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 TBC1D7Q9P0N9 293 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 EXOC7Q9UPT5 735 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 RALGAPA2Q2PPJ7 1873 aa13.06□□□□□ -0.32
SNF8-215ENST00000515572 TMEM265A0A087WTH1 108 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 EIF3DO15371 548 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNF8-215ENST00000515572 KLRC4O43908 158 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 TOM1L1O75674 476 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 RPN1P04843 607 aaKnown RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 EDN1P05305 212 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 MCF2P10911 925 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 ATF7P17544 494 aaPredicted RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 PROZP22891 400 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 DNAJB2P25686 324 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 LIG4P49917 911 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 RABGGTBP53611 331 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 ZNF568Q3ZCX4 644 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 KMT5BQ4FZB7 885 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 ZC2HC1CQ53FD0 456 aaPredicted RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 MPZL3Q6UWV2 235 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 ABI1Q8IZP0 508 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 ZNF689Q96CS4 500 aaPredicted RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 ACCSQ96QU6 501 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 TCHPQ9BT92 498 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 EIF2AQ9BY44 585 aaKnown RBP13.05□□□□□ -0.32
SNF8-215ENST00000515572 PTPRHQ9HD43 1115 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 RMND1Q9NWS8 449 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 IPPQ9Y573 584 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 NLRC5Q86WI3 1866 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 UBE4BO95155 1302 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
SNF8-215ENST00000515572 CLDN3O15551 220 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 SMC2O95347 1197 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 NPTXRO95502 500 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 MYBP10242 640 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 FGFR1P11362 822 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 ITGA4P13612 1032 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
SNF8-215ENST00000515572 PBX2P40425 430 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 CASP5P51878 434 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 KCNB1Q14721 858 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 KYAT1Q16773 422 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 SLFN12LQ6IEE8 588 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 GLB1LQ6UWU2 654 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
SNF8-215ENST00000515572 SMG8Q8ND04 991 aaKnown RBP13.04□□□□□ -0.32
SNF8-215ENST00000515572 HPS3Q969F9 1004 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 TIFAQ96CG3 184 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 GSDMAQ96QA5 445 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
SNF8-215ENST00000515572 TMEM117Q9H0C3 514 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 RC3H2Q9HBD1 1191 aaKnown RBP13.04□□□□□ -0.32
SNF8-215ENST00000515572 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
SNF8-215ENST00000515572 TDRD15B5MCY1 1934 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms