RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MCM2P49736 904 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 PTGDRQ13258 359 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 PDIA5Q14554 519 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 PPP2R5AQ15172 486 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 FNDC1Q4ZHG4 1894 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-215ENST00000515516 SLC27A1Q6PCB7 646 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 TMEM173Q86WV6 379 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-215ENST00000515516 RNF135Q8IUD6 432 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 DEPTORQ8TB45 409 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 RPGRIP1Q96KN7 1286 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 IFT74Q96LB3 600 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 PRIMPOLQ96LW4 560 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 GAD1Q99259 594 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 APOL5Q9BWW9 433 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 EMILIN2Q9BXX0 1053 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 ZBP1Q9H171 429 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 GIT1Q9Y2X7 761 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 BRWD1Q9NSI6 2320 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 PRR33A8MZF0 331 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 NRP1O14786 923 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 NPTXRO95502 500 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 MLH1P40692 756 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 OR1G1P47890 313 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 KCNC3Q14003 757 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 NBR1Q14596 966 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 CBX2Q14781 532 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-215ENST00000515516 MAPK6Q16659 721 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 AMHR2Q16671 573 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 KRT79Q5XKE5 535 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 DTHD1Q6ZMT9 781 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 PPFIBP1Q86W92 1011 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 SNX29Q8TEQ0 813 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 AUTS2Q8WXX7 1259 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 S1PR5Q9H228 398 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 DZANK1Q9NVP4 752 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 PARP2Q9UGN5 583 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 KIAA1024Q9UPX6 916 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 HES2Q9Y543 173 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 PCDHB6Q9Y5E3 794 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 HCFC2Q9Y5Z7 792 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 MYO7AQ13402 2215 aa15.12■□□□□ 0.01
TCOF1-215ENST00000515516 KIAA1671Q9BY89 1806 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 NCOR1O75376 2440 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 LOC730098B7Z3J9 87 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 N4BP3O15049 544 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 B4GALT5O43286 388 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 SSBP05455 408 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCOF1-215ENST00000515516 LIG1P18858 919 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
TCOF1-215ENST00000515516 ITIH3Q06033 890 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 SYCE2Q6PIF2 218 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 BCL7CQ8WUZ0 217 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-215ENST00000515516 SUSD6Q92537 303 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 RPS6KC1Q96S38 1066 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 ADPGKQ9BRR6 497 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 COLEC11Q9BWP8 271 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 BHMT2Q9H2M3 363 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 MRPL17Q9NRX2 175 aaKnown RBP15.11■□□□□ 0.01
TCOF1-215ENST00000515516 RAPGEFL1Q9UHV5 662 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 MUTYHQ9UIF7 546 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 DNM3Q9UQ16 869 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 PRG3Q9Y2Y8 225 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-215ENST00000515516 IRAK3Q9Y616 596 aa15.11■□□□□ 0.01
TCOF1-215ENST00000515516 INPPL1O15357 1258 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 AKAP5P24588 427 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 KLRC2P26717 231 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 GJB2P29033 226 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 NAMPTP43490 491 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 SCNN1GP51170 649 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 FAM187BQ17R55 369 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 RILPL1Q5EBL4 403 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 CDCA2Q69YH5 1023 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 APBB1IPQ7Z5R6 666 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 CABP7Q86V35 215 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 CDR2LQ86X02 465 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 RIPOR3Q96MK2 946 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 ZFP42Q96MM3 310 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 NECTIN4Q96NY8 510 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 ADAM7Q9H2U9 754 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 FZD8Q9H461 694 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 NXF3Q9H4D5 531 aaKnown RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 C11orf16Q9NQ32 467 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 SMC3Q9UQE7 1217 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 NR2E1Q9Y466 385 aa15.1■□□□□ 0.01
TCOF1-215ENST00000515516 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-215ENST00000515516 WDR81Q562E7 1941 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 SOD2P04179 222 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms