RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 HS2ST1Q7LGA3 356 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 FTHL17Q9BXU8 183 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 PTPRHQ9HD43 1115 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 TYW1Q9NV66 732 aaKnown RBP22.99■■□□□ 1.27
LSM6-207ENST00000515311 PIN4Q9Y237 131 aaKnown RBP22.99■■□□□ 1.27
LSM6-207ENST00000515311 CSF2RAP15509 400 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 PROZP22891 400 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 TMEM132AQ24JP5 1023 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 ZCWPW2Q504Y3 356 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 SLC39A4Q6P5W5 647 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 RPUSD2Q8IZ73 545 aaKnown RBP22.98■■□□□ 1.27
LSM6-207ENST00000515311 TMEM174Q8WUU8 243 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 VWCEQ96DN2 955 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 CPB2Q96IY4 423 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 GZF1Q9H116 711 aaPredicted RBP22.98■■□□□ 1.27
LSM6-207ENST00000515311 TMX1Q9H3N1 280 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 PDZD7Q9H5P4 517 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 USP20Q9Y2K6 914 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 STYXL1Q9Y6J8 313 aa22.98■■□□□ 1.27
LSM6-207ENST00000515311 CCNE1P24864 410 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 FPGSQ05932 587 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 LRRC63Q05C16 580 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 PAK1Q13153 545 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 PPIGQ13427 754 aaKnown RBP eCLIP22.97■■□□□ 1.27
LSM6-207ENST00000515311 DSC3Q14574 896 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 SLFN12LQ6IEE8 588 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 CNKSR3Q6P9H4 555 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 SLC27A1Q6PCB7 646 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 MPZL3Q6UWV2 235 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 APBB1IPQ7Z5R6 666 aaPredicted RBP22.97■■□□□ 1.27
LSM6-207ENST00000515311 DEFB128Q7Z7B8 93 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 DBF4BQ8NFT6 615 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 BADQ92934 168 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 P2RX5Q93086 422 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 TRAIPQ9BWF2 469 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 IKZF4Q9H2S9 585 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 SEMA6BQ9H3T3 888 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 IL23AQ9NPF7 189 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 AGPAT3Q9NRZ7 376 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 TRAF3IP3Q9Y228 551 aa22.97■■□□□ 1.27
LSM6-207ENST00000515311 MICAL3Q7RTP6 2002 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 ANKRD63C9JTQ0 380 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 ABLIM1O14639 778 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 CLDN3O15551 220 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 ZSCAN20P17040 1043 aaPredicted RBP22.96■■□□□ 1.27
LSM6-207ENST00000515311 SYN1P17600 705 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 ERCC5P28715 1186 aaPredicted RBP22.96■■□□□ 1.27
LSM6-207ENST00000515311 MCL1Q07820 350 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 NFIL3Q16649 462 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 KLHL10Q6JEL2 608 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 C12orf56Q8IXR9 622 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 NELFBQ8WX92 580 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 ADPGKQ9BRR6 497 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 RWDD2AQ9UIY3 292 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 ZMYND8Q9ULU4 1186 aaPredicted RBP22.96■■□□□ 1.27
LSM6-207ENST00000515311 CTNND2Q9UQB3 1225 aa22.96■■□□□ 1.27
LSM6-207ENST00000515311 A0A0B4J269 797 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 BICDL2A1A5D9 508 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 TISP43B9A030 160 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 CALUO43852 315 aaPredicted RBP22.95■■□□□ 1.26
LSM6-207ENST00000515311 MCF2P10911 925 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 GARTP22102 1010 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 ADSSP30520 456 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 ZNF445P59923 1031 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 EDRF1Q3B7T1 1238 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 DCAF4L1Q3SXM0 396 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 ZNF568Q3ZCX4 644 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 EEF1DP3Q658K8 133 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 TSG101Q99816 390 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 LBHD1Q9BQE6 289 aaPredicted RBP22.95■■□□□ 1.26
LSM6-207ENST00000515311 TCHPQ9BT92 498 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 ANP32EQ9BTT0 268 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 NAT10Q9H0A0 1025 aaKnown RBP22.95■■□□□ 1.26
LSM6-207ENST00000515311 ANKFY1Q9P2R3 1169 aa22.95■■□□□ 1.26
LSM6-207ENST00000515311 KIAA0391O15091 583 aaKnown RBP22.94■■□□□ 1.26
LSM6-207ENST00000515311 MGEA5O60502 916 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 MYBPC2Q14324 1141 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 NOLC1Q14978 699 aaKnown RBP eCLIP22.94■■□□□ 1.26
LSM6-207ENST00000515311 UBXN11Q5T124 520 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 TWF2Q6IBS0 349 aaKnown RBP22.94■■□□□ 1.26
LSM6-207ENST00000515311 SLC9A9Q8IVB4 645 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 ZBTB45Q96K62 511 aaPredicted RBP22.94■■□□□ 1.26
LSM6-207ENST00000515311 ADAM2Q99965 735 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 CDT1Q9H211 546 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 TSPYL2Q9H2G4 693 aaPredicted RBP22.94■■□□□ 1.26
LSM6-207ENST00000515311 RGS18Q9NS28 235 aa22.94■■□□□ 1.26
LSM6-207ENST00000515311 CAVIN2O95810 425 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 RAB27AP51159 221 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 PMS1P54277 932 aaKnown RBP22.93■■□□□ 1.26
LSM6-207ENST00000515311 ANO6Q4KMQ2 910 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 ANKRD40Q6AI12 368 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 TTI2Q6NXR4 508 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 ARMCX5Q6P1M9 558 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 LRSAM1Q6UWE0 723 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 C11orf57Q6ZUT1 292 aaPredicted RBP22.93■■□□□ 1.26
LSM6-207ENST00000515311 CDR2LQ86X02 465 aaPredicted RBP22.93■■□□□ 1.26
LSM6-207ENST00000515311 POMGNT1Q8WZA1 660 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 MSTO1Q9BUK6 570 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 HAPLN2Q9GZV7 340 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 DNAJC25Q9H1X3 360 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms