RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 OLFML3Q9NRN5 406 aa15.68■□□□□ 0.1
NUP54-216ENST00000514901 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
NUP54-216ENST00000514901 RWDD3Q9Y3V2 267 aa15.68■□□□□ 0.1
NUP54-216ENST00000514901 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 K7ENM7 598 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 ZNF202O95125 648 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 ATF7P17544 494 aaPredicted RBP15.67■□□□□ 0.1
NUP54-216ENST00000514901 ASIC1P78348 528 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 GTF2BQ00403 316 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 TAP1Q03518 808 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 ALCAMQ13740 583 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 DCAF4L1Q3SXM0 396 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 LONRF3Q496Y0 759 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 GLB1LQ6UWU2 654 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 ZPBP2Q6X784 338 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 TAS1R3Q7RTX0 852 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 HVCN1Q96D96 273 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 PAGE5Q96GU1 130 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 TGS1Q96RS0 853 aaKnown RBP15.67■□□□□ 0.1
NUP54-216ENST00000514901 FIZ1Q96SL8 496 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 PDZD7Q9H5P4 517 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 MRPL44Q9H9J2 332 aaKnown RBP15.67■□□□□ 0.1
NUP54-216ENST00000514901 TBX20Q9UMR3 447 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
NUP54-216ENST00000514901 GBF1Q92538 1859 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 LCHNA4D1U4 455 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 TBKBP1A7MCY6 615 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 ITGA4P13612 1032 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 AFMP43652 599 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 ERVK-21P61565 698 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 CLEC17AQ6ZS10 378 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 STXBP4Q6ZWJ1 553 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 UNC13DQ70J99 1090 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 DEFB123Q8N688 67 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 SMG8Q8ND04 991 aaKnown RBP15.66■□□□□ 0.1
NUP54-216ENST00000514901 CLP1Q92989 425 aaKnown RBP15.66■□□□□ 0.1
NUP54-216ENST00000514901 TARS2Q9BW92 718 aaKnown RBP15.66■□□□□ 0.1
NUP54-216ENST00000514901 EIF2AQ9BY44 585 aaKnown RBP15.66■□□□□ 0.1
NUP54-216ENST00000514901 MRPL9Q9BYD2 267 aaKnown RBP15.66■□□□□ 0.1
NUP54-216ENST00000514901 GOLPH3LQ9H4A5 285 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 KANSL3Q9P2N6 904 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 IPPQ9Y573 584 aa15.66■□□□□ 0.1
NUP54-216ENST00000514901 COL4A6Q14031 1691 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 CARNS1A5YM72 827 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 TTLL13PA6NNM8 815 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
NUP54-216ENST00000514901 TOM1L1O75674 476 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 NPTXRO95502 500 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 FGFR1P11362 822 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 NMT1P30419 496 aaKnown RBP15.65■□□□□ 0.1
NUP54-216ENST00000514901 FAM160A1Q05DH4 1040 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 COASYQ13057 564 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 KRBA2Q6ZNG9 492 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 BICD1Q96G01 975 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 CASD1Q96PB1 797 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 TCHPQ9BT92 498 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 TTYH1Q9H313 450 aaPredicted RBP15.65■□□□□ 0.1
NUP54-216ENST00000514901 RSAD1Q9HA92 442 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 PTPRHQ9HD43 1115 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 AAASQ9NRG9 546 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 RNF19AQ9NV58 838 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 EXOC7Q9UPT5 735 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 GIT1Q9Y2X7 761 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 CHD9Q3L8U1 2897 aa15.65■□□□□ 0.1
NUP54-216ENST00000514901 ZMYM2Q9UBW7 1377 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 SZT2Q5T011 3432 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 OFD1O75665 1012 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 PIGRP01833 764 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 EDN1P05305 212 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 RB1P06400 928 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 MCF2P10911 925 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 PROZP22891 400 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 LIG4P49917 911 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 CUL4BQ13620 913 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 NOMO2Q5JPE7 1267 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 CLLU1OSQ5K130 101 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 MPZL3Q6UWV2 235 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 AGMOQ6ZNB7 445 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 CDR2LQ86X02 465 aaPredicted RBP15.64■□□□□ 0.09
NUP54-216ENST00000514901 MAP4K3Q8IVH8 894 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 FMR1NBQ8N0W7 255 aaPredicted RBP15.64■□□□□ 0.09
NUP54-216ENST00000514901 URGCPQ8TCY9 931 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 HELQQ8TDG4 1101 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 LPPQ93052 612 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 TIGD1Q96MW7 591 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 STRA6Q9BX79 667 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 PLVAPQ9BX97 442 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 HOOK1Q9UJC3 728 aaKnown RBP15.64■□□□□ 0.09
NUP54-216ENST00000514901 USP20Q9Y2K6 914 aa15.64■□□□□ 0.09
NUP54-216ENST00000514901 CLDN3O15551 220 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 PPP1R37O75864 691 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 GCNT3O95395 438 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 BMPR1AP36894 532 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 GATMP50440 423 aa15.63■□□□□ 0.09
NUP54-216ENST00000514901 UBE2HP62256 183 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms