RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 RAB34Q9BZG1 259 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 C1orf112Q9NSG2 853 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 LRFN2Q9ULH4 789 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 PIN4Q9Y237 131 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 PCDHB7Q9Y5E2 793 aa12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 MRPL42Q9Y6G3 142 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-232ENST00000514755 ARHGEF35A5YM69 484 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 MEIS3P2A8K0S8 358 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 ASAP2O43150 1006 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 CYP11B2P19099 503 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.453e-6■□□□□ 10.5
UBE2D3-232ENST00000514755 MARCKSP29966 332 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 HOXA11P31270 313 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 PTENP60484 403 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 SRGAP1Q7Z6B7 1085 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 ZNF598Q86UK7 904 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 ECHDC2Q86YB7 292 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 TMEM192Q8IY95 271 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 USP28Q96RU2 1077 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 AGPAT5Q9NUQ2 364 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 MTCH2Q9Y6C9 303 aa12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 PRRC2BQ5JSZ5 2229 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 SPTBN5Q9NRC6 3674 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-232ENST00000514755 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 TBKBP1A7MCY6 615 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 EYA4O95677 639 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 SPECC1Q5M775 1068 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 HYIQ5T013 277 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 UBXN11Q5T124 520 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 USP49Q70CQ1 688 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 CMTR2Q8IYT2 770 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 MICALL1Q8N3F8 863 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 RNF169Q8NCN4 708 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 LPPQ93052 612 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 CPB2Q96IY4 423 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 ELAC1Q9H777 363 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
UBE2D3-232ENST00000514755 MYH15Q9Y2K3 1946 aa12.21□□□□□ -0.46
UBE2D3-232ENST00000514755 LRRIQ4A6NIV6 560 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 INO80B-WBP1J3KQ70 363 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 B4GALT5O43286 388 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 TSPAN1O60635 241 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 EDN1P05305 212 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 POU3F3P20264 500 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CTNNB1P35222 781 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 PHKA2P46019 1235 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 TMEM119Q4V9L6 283 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 RINT1Q6NUQ1 792 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CABP7Q86V35 215 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CDR2LQ86X02 465 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 DAW1Q8N136 415 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CLIC6Q96NY7 704 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 KIFC3Q9BVG8 833 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 FAM105AQ9NUU6 356 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 FBXO2Q9UK22 296 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 DNM3Q9UQ16 869 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
UBE2D3-232ENST00000514755 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 C5orf67F2Z3F1 127 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 H3BNC9 293 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 CSPG5O95196 566 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 BMP15O95972 392 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 ARF4P18085 180 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 BMPR1AP36894 532 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 POU5F1BQ06416 359 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 GPM6BQ13491 265 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 TFDP1Q14186 410 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 CDCA2Q69YH5 1023 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 HELQQ8TDG4 1101 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 EPSTI1Q96J88 318 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 ZSCAN16Q9H4T2 348 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 CWH43Q9H720 699 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms