RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.41	□□□□□ -1.7
CALCOCO2-223	ENST00000514267	TOMM22	Q9NS69	142 aa		4.41	□□□□□ -1.7
CALCOCO2-223	ENST00000514267	PLA2G3	Q9NZ20	509 aa		4.41	□□□□□ -1.7
CALCOCO2-223	ENST00000514267	RCAN3	Q9UKA8	241 aa		4.41	□□□□□ -1.7
CALCOCO2-223	ENST00000514267	CDC42EP3	Q9UKI2	254 aa		4.41	□□□□□ -1.7
CALCOCO2-223	ENST00000514267	PTPN22	Q9Y2R2	807 aa		4.41	□□□□□ -1.7
CALCOCO2-223	ENST00000514267		A0A1W2PRX2	142 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GOLGA8A	A7E2F4	631 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GOLGA8B	A8MQT2	603 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	DVL2	O14641	736 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MTSS1	O43312	755 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PRPF3	O43395	683 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NRP2	O60462	931 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PEX11B	O96011	259 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	JUN	P05412	331 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TRIM27	P14373	513 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SLC9A1	P19634	815 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ACO1	P21399	889 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	AKAP5	P24588	427 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GPR3	P46089	330 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ADCY2	Q08462	1091 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TCIRG1	Q13488	830 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GBX1	Q14549	363 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GJC2	Q5T442	439 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	EFCAB2	Q5VUJ9	269 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PRAMEF9	Q5VWM5	478 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KIAA1841	Q6NSI8	718 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PPP4R4	Q6NUP7	873 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MAMDC4	Q6UXC1	1216 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PALM2	Q8IXS6	379 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SVIP	Q8NHG7	77 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CFHR4	Q92496	578 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CLIP3	Q96DZ5	547 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SLC39A13	Q96H72	371 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	DYDC2	Q96IM9	177 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PAWR	Q96IZ0	340 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	HIST1H2AH	Q96KK5	128 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	C16orf92	Q96LL3	132 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	WDR92	Q96MX6	357 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	WWC2-AS2	Q96NR7	200 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	HIST1H2AJ	Q99878	128 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PTPN18	Q99952	460 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	OSBPL6	Q9BZF3	934 aa		4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	VSTM5	A8MXK1	200 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KDM1A	O60341	852 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	LPO	P22079	712 aa	Predicted RBP	4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MSX2	P35548	267 aa	Predicted RBP	4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	GPR15	P49685	360 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	STAT5B	P51692	787 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SCAND1	P57086	179 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	DUSP8	Q13202	625 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	BRD3	Q15059	726 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SPDYA	Q5MJ70	313 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SLC4A10	Q6U841	1118 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TPH2	Q8IWU9	490 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	OR14K1	Q8NGZ2	314 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SARG	Q9BW04	601 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KRTAP4-5	Q9BYR2	181 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	HAPLN2	Q9GZV7	340 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KCNG1	Q9UIX4	513 aa		4.39	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MATN2	O00339	956 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	XPOT	O43592	962 aa	Known RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PCDHGA12	O60330	932 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	IPO13	O94829	963 aa	Known RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	IL33	O95760	270 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	VSIG10L2	P0DP72	767 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PHKG2	P15735	406 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	HSPA6	P17066	643 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ENPP1	P22413	925 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	XPA	P23025	273 aa	Predicted RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ADCY7	P51828	1080 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FOXE3	Q13461	319 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	RIN1	Q13671	783 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FSCN1	Q16658	493 aa	Known RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NRN1L	Q496H8	165 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	MIIP	Q5JXC2	388 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	FSTL4	Q6MZW2	842 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ESRP1	Q6NXG1	681 aa	Known RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KSR2	Q6VAB6	950 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ESPNL	Q6ZVH7	1005 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	KANSL1	Q7Z3B3	1105 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SPRED1	Q7Z699	444 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	C11orf96	Q7Z7L8	435 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	SGMS1	Q86VZ5	419 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	D2HGDH	Q8N465	521 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NKD2	Q969F2	451 aa	Predicted RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	TTC17	Q96AE7	1141 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZNF747	Q9BV97	191 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	NMRK2	Q9NPI5	230 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PARPBP	Q9NWS1	579 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PCDHGA8	Q9Y5G5	932 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PCDHGA7	Q9Y5G6	932 aa		4.38	□□□□□ -1.71
CALCOCO2-223	ENST00000514267	PCDHGA6	Q9Y5G7	932 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms