RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ZNF233A6NK53 670 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PRELPP51888 382 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SLC12A2P55011 1212 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SYCP2LQ5T4T6 812 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ATG16L1Q676U5 607 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CENPPQ6IPU0 288 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 AFAP1L2Q8N4X5 818 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SLC13A1Q9BZW2 595 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 LRRC10BA6NIK2 292 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 LPXNO60711 386 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 RTN2O75298 545 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ATP6V1G2O95670 118 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 EIF2AK2P19525 551 aaKnown RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 HMGB2P26583 209 aaKnown RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ARSEP51690 589 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SLC8A3P57103 927 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ZNF844Q08AG5 666 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ZNF571Q7Z3V5 609 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SH3RF1Q7Z6J0 888 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CNPY4Q8N129 248 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CCDC124Q96CT7 223 aaKnown RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ZBTB10Q96DT7 871 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 TTC25Q96NG3 672 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CYP4F11Q9HBI6 524 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CD209Q9NNX6 404 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 FIS1Q9Y3D6 152 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 TCRBV5S4A2TA0A5A2 114 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MYBL1P10243 752 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PSMA2P25787 234 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 OSTNP61366 133 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 KDSRQ06136 332 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 STAT4Q14765 748 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MEA1Q16626 185 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 EDRF1Q3B7T1 1238 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ZBTB33Q86T24 672 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MAP7D3Q8IWC1 876 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CCT6BQ92526 530 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ZKSCAN4Q969J2 545 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 FAF2Q96CS3 445 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 FAM129AQ9BZQ8 928 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 DLGAP2Q9P1A6 1054 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 FAM47DPA6NHR8 397 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 IPO5O00410 1097 aaKnown RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 GH2P01242 217 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 TMEM253P0C7T8 217 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CDC25CP30307 473 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SKOR1P84550 965 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 AMPD2Q01433 879 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MAPK7Q13164 816 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PRKG1Q13976 671 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 CDO1Q16878 200 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 P3H1Q32P28 736 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MTERF2Q49AM1 385 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SBK1Q52WX2 424 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 RAPH1Q70E73 1250 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MCF2L2Q86YR7 1114 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 DNAJC9Q8WXX5 260 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 KLF6Q99612 283 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 FAM213AQ9BRX8 229 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 NDE1Q9NXR1 346 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PI4KBQ9UBF8 816 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 TACC3Q9Y6A5 838 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SMIM22K7EJ46 135 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PPFIA2O75334 1257 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SETSIPP0DME0 302 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 RASA1P20936 1047 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PON1P27169 355 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PGM1P36871 562 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 NT5C2P49902 561 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 DCLK2Q8N568 766 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ATL2Q8NHH9 583 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 PICK1Q9NRD5 415 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 REXO2Q9Y3B8 237 aaKnown RBP8.26□□□□□ -1.09
CLCN3-209ENST00000513761 SCINQ9Y6U3 715 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 MX2P20592 715 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ITGA8P53708 1063 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 CLEC4GQ6UXB4 293 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 AGGF1Q8N302 714 aaeCLIP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 DEPDC1BQ8WUY9 529 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 RBM41Q96IZ5 413 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 DONSONQ9NYP3 566 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 H0YCG3 227 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 NVLO15381 856 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 PPIP5K2O43314 1243 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 CREB3O43889 395 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 KRT37O76014 449 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 FSBPO95073 299 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 FXR2P51116 673 aaKnown RBP eCLIP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 LMBRD2Q68DH5 695 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 PCGF5Q86SE9 256 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ZNF34Q8IZ26 560 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 LXNQ9BS40 222 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms