RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 PCDHA12Q9UN75 941 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 COL4A3BPQ9Y5P4 624 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 MYO10Q9HD67 2058 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 SYCE3A1L190 88 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 ZNF623O75123 536 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 SLITRK3O94933 977 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 CSPG5O95196 566 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 LYPLA2O95372 231 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 GLP2RO95838 553 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 SKIP12755 728 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 NRIP1P48552 1158 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 NDUFV1P49821 464 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 RAB27AP51159 221 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 COASYQ13057 564 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 BRAPQ7Z569 592 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 SRGAP1Q7Z6B7 1085 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 KSR1Q8IVT5 923 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 ADHFE1Q8IWW8 467 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 FBXO18Q8NFZ0 1043 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 TCP11Q8WWU5 503 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 PSPC1Q8WXF1 523 aaKnown RBP10.95□□□□□ -0.66
CCL28-203ENST00000513525 DYDC2Q96IM9 177 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 NLRP4Q96MN2 994 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 ZNF558Q96NG5 402 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 CDCA3Q99618 268 aaPredicted RBP10.95□□□□□ -0.66
CCL28-203ENST00000513525 CLEC1BQ9P126 229 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 CD207Q9UJ71 328 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 PIN4Q9Y237 131 aaKnown RBP10.95□□□□□ -0.66
CCL28-203ENST00000513525 C2orf16Q68DN1 1984 aa10.95□□□□□ -0.66
CCL28-203ENST00000513525 CARNS1A5YM72 827 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 GOLGA6L4A6NEF3 574 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 ASAP2O43150 1006 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 NEMFO60524 1076 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 GPR37L1O60883 481 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 NASPP49321 788 aaPredicted RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 ERVFC1P60507 584 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 EMC2Q15006 297 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 CALCRLQ16602 461 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 TWF2Q6IBS0 349 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 CATSPER4Q7RTX7 472 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 SMRP1Q8NCR6 262 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 HELQQ8TDG4 1101 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 MTMR9Q96QG7 549 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 HSD17B14Q9BPX1 270 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 TSPY26PQ9H489 355 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 TLE6Q9H808 572 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 AGPAT5Q9NUQ2 364 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 FAM105AQ9NUU6 356 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 PUF60Q9UHX1 559 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 RCOR1Q9UKL0 485 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 PCDHGC5Q9Y5F6 944 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 ZNF318Q5VUA4 2279 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 WNT7AO00755 349 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 CYP4A11Q02928 519 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 KRT17Q04695 432 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 LAMTOR4Q0VGL1 99 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 KCNC3Q14003 757 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 CTTNQ14247 550 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 PCBP1Q15365 356 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCL28-203ENST00000513525 CLUL1Q15846 466 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 DUSP6Q16828 381 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 XKR9Q5GH70 373 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 FAM173BQ6P4H8 233 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 RBM23Q86U06 439 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 SLC39A11Q8N1S5 342 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 RNF169Q8NCN4 708 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 MICAL1Q8TDZ2 1067 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 ANP32BQ92688 251 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 TMEM143Q96AN5 459 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 MTRQ99707 1265 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 LRFN3Q9BTN0 628 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 TTC12Q9H892 705 aaPredicted RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 NGRNQ9NPE2 291 aaKnown RBP10.94□□□□□ -0.66
CCL28-203ENST00000513525 C11orf16Q9NQ32 467 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 XPNPEP1Q9NQW7 623 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 ANKEF1Q9NU02 776 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 SPG21Q9NZD8 308 aa10.94□□□□□ -0.66
CCL28-203ENST00000513525 CITO14578 2027 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 NRG2O14511 850 aaPredicted RBP10.93□□□□□ -0.66
CCL28-203ENST00000513525 ZBTB39O15060 712 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 ALADP13716 330 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 PBX3P40426 434 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 POU5F1BQ06416 359 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 ORC2Q13416 577 aaPredicted RBP10.93□□□□□ -0.66
CCL28-203ENST00000513525 MXD4Q14582 209 aaPredicted RBP10.93□□□□□ -0.66
CCL28-203ENST00000513525 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCL28-203ENST00000513525 TMEM31Q5JXX7 168 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 TMEM184AQ6ZMB5 413 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 TCF25Q9BQ70 676 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 MINDY3Q9H8M7 445 aa10.93□□□□□ -0.66
CCL28-203ENST00000513525 DDX19AQ9NUU7 478 aaKnown RBP10.93□□□□□ -0.66
CCL28-203ENST00000513525 TFIP11Q9UBB9 837 aaKnown RBP10.93□□□□□ -0.66
CCL28-203ENST00000513525 TECTAO75443 2155 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms