RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 SLC22A17Q8WUG5 538 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 PRIMPOLQ96LW4 560 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 AIFM3Q96NN9 605 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 SH2D3AQ9BRG2 576 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 HERC2P3Q9BVR0 1158 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 IGSF9Q9P2J2 1179 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 ORC3Q9UBD5 711 aaPredicted RBP12.21□□□□□ -0.45
SKP2-207ENST00000513263 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 GIT1Q9Y2X7 761 aa12.21□□□□□ -0.45
SKP2-207ENST00000513263 TRIP11Q15643 1979 aa12.21□□□□□ -0.46
SKP2-207ENST00000513263 INO80B-WBP1J3KQ70 363 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
SKP2-207ENST00000513263 NEMFO60524 1076 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 GLUD1P00367 558 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 EPCAMP16422 314 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 HOXA11P31270 313 aaPredicted RBP12.2□□□□□ -0.46
SKP2-207ENST00000513263 GLUD2P49448 558 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 CLCN4P51793 760 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 CLCN5P51795 746 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 TCF15Q12870 199 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 SLC27A1Q6PCB7 646 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 HAS1Q92839 578 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 ATOH1Q92858 354 aaPredicted RBP12.2□□□□□ -0.46
SKP2-207ENST00000513263 NXPE3Q969Y0 559 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 DNAJB4Q9UDY4 337 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 IPPQ9Y573 584 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
SKP2-207ENST00000513263 ARL5CA6NH57 179 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 MEIS3P2A8K0S8 358 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 NRP1O14786 923 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 TSPAN1O60635 241 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 POMCP01189 267 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
SKP2-207ENST00000513263 VCPP55072 806 aaKnown RBP12.19□□□□□ -0.46
SKP2-207ENST00000513263 CYP4A11Q02928 519 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 GRIK3Q13003 919 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 TDGQ13569 410 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 SAFBQ15424 915 aaKnown RBP eCLIP12.19□□□□□ -0.46
SKP2-207ENST00000513263 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
SKP2-207ENST00000513263 TMC5Q6UXY8 1006 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 TPH2Q8IWU9 490 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 DYDC2Q96IM9 177 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 KLHL5Q96PQ7 755 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 RPS6KC1Q96S38 1066 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 COLEC11Q9BWP8 271 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 PLEKHA4Q9H4M7 779 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 MINDY3Q9H8M7 445 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 PRMT7Q9NVM4 692 aaPredicted RBP12.19□□□□□ -0.46
SKP2-207ENST00000513263 DUSP12Q9UNI6 340 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
SKP2-207ENST00000513263 PROB1E7EW31 1015 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 GFRA3O60609 400 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 BRD1O95696 1058 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
SKP2-207ENST00000513263 MLH1P40692 756 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 OR1G1P47890 313 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 RARRES1P49788 294 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 AK2P54819 239 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 DSG1Q02413 1049 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 DSC1Q08554 894 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 UBXN11Q5T124 520 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 IER5LQ5T953 404 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 PDXDC1Q6P996 788 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 APBB1IPQ7Z5R6 666 aaPredicted RBP12.18□□□□□ -0.46
SKP2-207ENST00000513263 ZNF280BQ86YH2 543 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 COLGALT2Q8IYK4 626 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 ERMNQ8TAM6 284 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 AUTS2Q8WXX7 1259 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
SKP2-207ENST00000513263 RTP3Q9BQQ7 232 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 TTC12Q9H892 705 aaPredicted RBP12.18□□□□□ -0.46
SKP2-207ENST00000513263 MAN1C1Q9NR34 630 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 ZDHHC7Q9NXF8 308 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 WRAP73Q9P2S5 460 aaPredicted RBP12.18□□□□□ -0.46
SKP2-207ENST00000513263 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 ZFP37Q9Y6Q3 630 aaPredicted RBP12.18□□□□□ -0.46
SKP2-207ENST00000513263 ZNF292O60281 2723 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 FANCMQ8IYD8 2048 aa12.18□□□□□ -0.46
SKP2-207ENST00000513263 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 SF3B1O75533 1304 aaKnown RBP eCLIP12.17□□□□□ -0.46
SKP2-207ENST00000513263 PHLPP2Q6ZVD8 1323 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 LILRB3O75022 631 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 DDHD2O94830 711 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 SLITRK3O94933 977 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 SSBP05455 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
SKP2-207ENST00000513263 MUTP22033 750 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 MBTD1Q05BQ5 628 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 ELAVL2Q12926 359 aaKnown RBP12.17□□□□□ -0.46
SKP2-207ENST00000513263 CAPSQ13938 189 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 CTTNQ14247 550 aaKnown RBP12.17□□□□□ -0.46
SKP2-207ENST00000513263 USP41Q3LFD5 358 aa12.17□□□□□ -0.46
SKP2-207ENST00000513263 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms