RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 SLC27A1Q6PCB7 646 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 KRBA2Q6ZNG9 492 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 Q7L0L9 218 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 SPRED2Q7Z698 418 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 ZNF598Q86UK7 904 aaKnown RBP19.13■□□□□ 0.65
DDR1-270ENST00000513043 CCDC51Q96ER9 411 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 TRAIPQ9BWF2 469 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 MRPL4Q9BYD3 311 aaKnown RBP19.13■□□□□ 0.65
DDR1-270ENST00000513043 TRIM6Q9C030 488 aaPredicted RBP19.13■□□□□ 0.65
DDR1-270ENST00000513043 ELAC1Q9H777 363 aaKnown RBP19.13■□□□□ 0.65
DDR1-270ENST00000513043 MRPL44Q9H9J2 332 aaKnown RBP19.13■□□□□ 0.65
DDR1-270ENST00000513043 CERS4Q9HA82 394 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 RNF19AQ9NV58 838 aa19.13■□□□□ 0.65
DDR1-270ENST00000513043 FRMD3A2A2Y4 597 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 TBKBP1A7MCY6 615 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 PRR29P0C7W0 189 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 SKIP12755 728 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 BTG3Q14201 252 aaPredicted RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 CLLU1OSQ5K130 101 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 FMR1NBQ8N0W7 255 aaPredicted RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 SMG8Q8ND04 991 aaKnown RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 HELQQ8TDG4 1101 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 BICD1Q96G01 975 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 ACO2Q99798 780 aaKnown RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 FGFBP2Q9BYJ0 223 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 NXF3Q9H4D5 531 aaKnown RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 RC3H2Q9HBD1 1191 aaKnown RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
DDR1-270ENST00000513043 SEL1LQ9UBV2 794 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 MTUS1Q9ULD2 1270 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 TBX20Q9UMR3 447 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 IPPQ9Y573 584 aa19.12■□□□□ 0.65
DDR1-270ENST00000513043 LINC01553A4QN01 128 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZNF623O75123 536 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 PRPF40AO75400 957 aaKnown RBP19.11■□□□□ 0.65
DDR1-270ENST00000513043 GCNT3O95395 438 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 EOMESO95936 686 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 HARSP12081 509 aaKnown RBP19.11■□□□□ 0.65
DDR1-270ENST00000513043 TAP1Q03518 808 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 FAM160A1Q05DH4 1040 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZNF697Q5TEC3 545 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZNF720Q7Z2F6 126 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZBTB33Q86T24 672 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 ABI1Q8IZP0 508 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 FIBCD1Q8N539 461 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZNF689Q96CS4 500 aaPredicted RBP19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZBTB45Q96K62 511 aaPredicted RBP19.11■□□□□ 0.65
DDR1-270ENST00000513043 ADPGKQ9BRR6 497 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 RNF39Q9H2S5 420 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 TTYH1Q9H313 450 aaPredicted RBP19.11■□□□□ 0.65
DDR1-270ENST00000513043 ZNF576Q9H609 170 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 HCSTQ9UBK5 93 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 INPP5FQ9Y2H2 1132 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 COL4A6Q14031 1691 aa19.11■□□□□ 0.65
DDR1-270ENST00000513043 MYBP10242 640 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 ITGA4P13612 1032 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 CASP5P51878 434 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 SNW1Q13573 536 aaKnown RBP19.1■□□□□ 0.65
DDR1-270ENST00000513043 ZNF568Q3ZCX4 644 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 CNNM4Q6P4Q7 775 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 AGMOQ6ZNB7 445 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 UNC13DQ70J99 1090 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 MRPL10Q7Z7H8 261 aaKnown RBP19.1■□□□□ 0.65
DDR1-270ENST00000513043 GLIS3Q8NEA6 775 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 ENGASEQ8NFI3 743 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 SP7Q8TDD2 431 aaPredicted RBP19.1■□□□□ 0.65
DDR1-270ENST00000513043 PGBD4Q96DM1 585 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 CASD1Q96PB1 797 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 TCHPQ9BT92 498 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 IKZF4Q9H2S9 585 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 ANKFY1Q9P2R3 1169 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 TNFSF13BQ9Y275 285 aa19.1■□□□□ 0.65
DDR1-270ENST00000513043 HOXA2O43364 376 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 GTPBP6O43824 516 aaPredicted RBP19.09■□□□□ 0.65
DDR1-270ENST00000513043 NR1I2O75469 434 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 AKAP5P24588 427 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 MATR3P43243 847 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDR1-270ENST00000513043 GTF2BQ00403 316 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 CMTR2Q8IYT2 770 aaKnown RBP19.09■□□□□ 0.65
DDR1-270ENST00000513043 SLC17A8Q8NDX2 589 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 TMEM117Q9H0C3 514 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 OLFML3Q9NRN5 406 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 PARP2Q9UGN5 583 aa19.09■□□□□ 0.65
DDR1-270ENST00000513043 MRPL42Q9Y6G3 142 aaKnown RBP19.09■□□□□ 0.65
DDR1-270ENST00000513043 HNRNPDLO14979 420 aaKnown RBP19.08■□□□□ 0.64
DDR1-270ENST00000513043 LIG4P49917 911 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 KCNA1Q09470 495 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 FAM26FQ5R3K3 315 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 GPR153Q6NV75 609 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 GLB1LQ6UWU2 654 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 MPZL3Q6UWV2 235 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 MAP4K3Q8IVH8 894 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 DEFB123Q8N688 67 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 ARNTL2Q8WYA1 636 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 C17orf80Q9BSJ5 609 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 CDT1Q9H211 546 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 SEMA6BQ9H3T3 888 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 ST6GALNAC4Q9H4F1 302 aa19.08■□□□□ 0.64
DDR1-270ENST00000513043 RSAD1Q9HA92 442 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms