RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
SDHA-215ENST00000512962 CYP26B1Q9NR63 512 aa13.99□□□□□ -0.17
SDHA-215ENST00000512962 ACACBO00763 2458 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 CCNE2O96020 404 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 CA8P35219 290 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 METAP2P50579 478 aaKnown RBP eCLIP13.98□□□□□ -0.173e-6■■■■□ 25.7
SDHA-215ENST00000512962 TDGQ13569 410 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 COL9A3Q14050 684 aaPredicted RBP13.98□□□□□ -0.17
SDHA-215ENST00000512962 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
SDHA-215ENST00000512962 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
SDHA-215ENST00000512962 LRRC43Q8N309 656 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 VN1R3Q9BXE9 311 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 ZBP1Q9H171 429 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 ELAC1Q9H777 363 aaKnown RBP13.98□□□□□ -0.17
SDHA-215ENST00000512962 KCNK12Q9HB15 430 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.177e-6■■■■■ 74.5
SDHA-215ENST00000512962 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 SLC9A2Q9UBY0 812 aa13.98□□□□□ -0.17
SDHA-215ENST00000512962 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
SDHA-215ENST00000512962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.97□□□□□ -0.17
SDHA-215ENST00000512962 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 B4GALT3O60512 393 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 GPR32O75388 356 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 PLEKHA8P1O95397 391 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 VTNP04004 478 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
SDHA-215ENST00000512962 ATP4AP20648 1035 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 STAT5BP51692 787 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 ANTXR2P58335 489 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 RSPO4Q2I0M5 234 aaPredicted RBP13.97□□□□□ -0.17
SDHA-215ENST00000512962 CCDC60Q8IWA6 550 aaPredicted RBP13.97□□□□□ -0.17
SDHA-215ENST00000512962 ZNF295-AS1Q8N0V1 137 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 NME8Q8N427 588 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 ZDHHC1Q8WTX9 485 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 PGBD1Q96JS3 809 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 ZNF668Q96K58 619 aaPredicted RBP13.97□□□□□ -0.17
SDHA-215ENST00000512962 ZNF395Q9H8N7 513 aaPredicted RBP13.97□□□□□ -0.17
SDHA-215ENST00000512962 KCNH7Q9NS40 1196 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 USP24Q9UPU5 2620 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 MIA3Q5JRA6 1907 aa13.97□□□□□ -0.17
SDHA-215ENST00000512962 CACNA1IQ9P0X4 2223 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 IGKV6D-21A0A0A0MT36 114 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 LRRN2O75325 713 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 C22orf31O95567 290 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 CXCL14O95715 111 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 DCNP07585 359 aaKnown RBP13.96□□□□□ -0.17
SDHA-215ENST00000512962 GLULP15104 373 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 MPSTP25325 297 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 MAPK1P28482 360 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 COX20Q5RI15 118 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 ATAT1Q5SQI0 421 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 SH3PXD2AQ5TCZ1 1133 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 PLPPR4Q7Z2D5 763 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 TICAM2Q86XR7 235 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 ECHDC2Q86YB7 292 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 MAML2Q8IZL2 1156 aaPredicted RBP13.96□□□□□ -0.17
SDHA-215ENST00000512962 SUMF1Q8NBK3 374 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 ST13P5Q8NFI4 369 aaPredicted RBP13.96□□□□□ -0.17
SDHA-215ENST00000512962 CDHR1Q96JP9 859 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 AZI2Q9H6S1 392 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 FBXL21Q9UKT6 434 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 CA14Q9ULX7 337 aa13.96□□□□□ -0.17
SDHA-215ENST00000512962 MYH9P35579 1960 aaKnown RBP13.96□□□□□ -0.18
SDHA-215ENST00000512962 ANKRD33BA6NCL7 494 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 EML1O00423 815 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
SDHA-215ENST00000512962 GPR182O15218 404 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 FAM13AO94988 1023 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 SP9P0CG40 484 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 FGFR4P22455 802 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 PPM1AP35813 382 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 BCAR1P56945 870 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 KRT17Q04695 432 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 TRAF1Q13077 416 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 TEAD4Q15561 434 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 SPECC1Q5M775 1068 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 GPR149Q86SP6 731 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 VPS52Q8N1B4 723 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 MEIOBQ8N635 442 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 RNF169Q8NCN4 708 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 CUL5Q93034 780 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 DZANK1Q9NVP4 752 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 RALYQ9UKM9 306 aaKnown RBP13.95□□□□□ -0.18
SDHA-215ENST00000512962 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 MYH15Q9Y2K3 1946 aa13.95□□□□□ -0.18
SDHA-215ENST00000512962 SERTM1A2A2V5 107 aa13.94□□□□□ -0.18
SDHA-215ENST00000512962 MEIS3P2A8K0S8 358 aa13.94□□□□□ -0.18
SDHA-215ENST00000512962 DDX39AO00148 427 aaKnown RBP13.94□□□□□ -0.18
SDHA-215ENST00000512962 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
SDHA-215ENST00000512962 CYP21A2P08686 494 aa13.94□□□□□ -0.18
SDHA-215ENST00000512962 CLCN3P51790 818 aa13.94□□□□□ -0.18
SDHA-215ENST00000512962 CRYBB1P53674 252 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms