RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 DOCK8Q8NF50 2099 aa17.86■□□□□ 0.45
DDR1-269ENST00000512725 PRPF3O43395 683 aaKnown RBP17.85■□□□□ 0.45
DDR1-269ENST00000512725 TGM5O43548 720 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 STBD1O95210 358 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 RPL17P18621 184 aaKnown RBP17.85■□□□□ 0.45
DDR1-269ENST00000512725 FSHRP23945 695 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 MLH1P40692 756 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 SCNN1GP51170 649 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 USP11P51784 963 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 NPEPPSP55786 919 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 NLRP5P59047 1200 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 GPC5P78333 572 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 VARS2Q5ST30 1063 aaKnown RBP17.85■□□□□ 0.45
DDR1-269ENST00000512725 COLGALT2Q8IYK4 626 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 SUMF1Q8NBK3 374 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 TBCKQ8TEA7 893 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 ATRIPQ8WXE1 791 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 SLC7A3Q8WY07 619 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 SECISBP2LQ93073 1101 aaKnown RBP17.85■□□□□ 0.45
DDR1-269ENST00000512725 TMEM143Q96AN5 459 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 GAD1Q99259 594 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 RPP25Q9BUL9 199 aaKnown RBP17.85■□□□□ 0.45
DDR1-269ENST00000512725 SLC26A6Q9BXS9 759 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 PRKD2Q9BZL6 878 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
DDR1-269ENST00000512725 MINDY3Q9H8M7 445 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 RXFP1Q9HBX9 757 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 UBN1Q9NPG3 1134 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 SLC2A4RGQ9NR83 387 aa17.85■□□□□ 0.45
DDR1-269ENST00000512725 CACNA1BQ00975 2339 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 CACNA1IQ9P0X4 2223 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 MIA3Q5JRA6 1907 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 ARL5CA6NH57 179 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 ERLIN2O94905 339 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 CPA1P15085 419 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 NCLP19338 710 aaKnown RBP17.84■□□□□ 0.45
DDR1-269ENST00000512725 DSG1Q02413 1049 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 UBXN11Q5T124 520 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 ANO5Q75V66 913 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 SRGAP1Q7Z6B7 1085 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 HDAC7Q8WUI4 952 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 PRPF31Q8WWY3 499 aaKnown RBP17.84■□□□□ 0.45
DDR1-269ENST00000512725 PSPC1Q8WXF1 523 aaKnown RBP17.84■□□□□ 0.45
DDR1-269ENST00000512725 CEP170P1Q96L14 293 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 COLEC11Q9BWP8 271 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 RHOBTB2Q9BYZ6 727 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 ZDHHC7Q9NXF8 308 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 POLIQ9UNA4 740 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 IPPQ9Y573 584 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 FANCMQ8IYD8 2048 aa17.84■□□□□ 0.45
DDR1-269ENST00000512725 KANSL1LA0AUZ9 987 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 ANHXE9PGG2 379 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 EDIL3O43854 480 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 TDP2O95551 362 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 HOXA11P31270 313 aaPredicted RBP17.83■□□□□ 0.44
DDR1-269ENST00000512725 RCAN1P53805 252 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 PSMC5P62195 406 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 PARM1Q6UWI2 310 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 Q6ZUG5 572 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 GRASPQ7Z6J2 395 aaPredicted RBP17.83■□□□□ 0.44
DDR1-269ENST00000512725 RASEFQ8IZ41 740 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 SMG8Q8ND04 991 aaKnown RBP17.83■□□□□ 0.44
DDR1-269ENST00000512725 CNNM3Q8NE01 707 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 FGF14Q92915 247 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 BRF1Q92994 677 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 EIF2AQ9BY44 585 aaKnown RBP17.83■□□□□ 0.44
DDR1-269ENST00000512725 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 MIOSQ9NXC5 875 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 USP18Q9UMW8 372 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 HES2Q9Y543 173 aa17.83■□□□□ 0.44
DDR1-269ENST00000512725 MTCL1Q9Y4B5 1905 aaKnown RBP17.82■□□□□ 0.44
DDR1-269ENST00000512725 CD72P21854 359 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 STARD6P59095 220 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 NTHL1P78549 312 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 LAMTOR4Q0VGL1 99 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 KRT32Q14532 448 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 USP41Q3LFD5 358 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 Q4G0T1 1027 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 MAML2Q8IZL2 1156 aaPredicted RBP17.82■□□□□ 0.44
DDR1-269ENST00000512725 ZNF579Q8NAF0 562 aaKnown RBP17.82■□□□□ 0.44
DDR1-269ENST00000512725 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 ZFP42Q96MM3 310 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 TRIM6Q9C030 488 aaPredicted RBP17.82■□□□□ 0.44
DDR1-269ENST00000512725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.82■□□□□ 0.44
DDR1-269ENST00000512725 CDV3Q9UKY7 258 aaKnown RBP17.82■□□□□ 0.44
DDR1-269ENST00000512725 OTOGLQ3ZCN5 2332 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 TDRD15B5MCY1 1934 aaKnown RBP17.82■□□□□ 0.44
DDR1-269ENST00000512725 MYH15Q9Y2K3 1946 aa17.82■□□□□ 0.44
DDR1-269ENST00000512725 NCOR2Q9Y618 2525 aa17.81■□□□□ 0.44
DDR1-269ENST00000512725 FAM170BA6NMN3 283 aa17.81■□□□□ 0.44
DDR1-269ENST00000512725 SPTLC1O15269 473 aa17.81■□□□□ 0.44
DDR1-269ENST00000512725 TADA2AO75478 443 aa17.81■□□□□ 0.44
DDR1-269ENST00000512725 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
DDR1-269ENST00000512725 SDHBP21912 280 aa17.81■□□□□ 0.44
DDR1-269ENST00000512725 ATXN1P54253 815 aaKnown RBP17.81■□□□□ 0.44
DDR1-269ENST00000512725 NCBP1Q09161 790 aaKnown RBP17.81■□□□□ 0.44
DDR1-269ENST00000512725 MLF2Q15773 248 aaPredicted RBP17.81■□□□□ 0.44
DDR1-269ENST00000512725 SLC44A4Q53GD3 710 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms