RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 MIER3Q7Z3K6 550 aa14.09□□□□□ -0.15
DDX41-215ENST00000512431 ST13P5Q8NFI4 369 aaPredicted RBP14.09□□□□□ -0.15
DDX41-215ENST00000512431 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
DDX41-215ENST00000512431 BICD2Q8TD16 824 aa14.09□□□□□ -0.15
DDX41-215ENST00000512431 COLEC11Q9BWP8 271 aa14.09□□□□□ -0.15
DDX41-215ENST00000512431 ZMYND12Q9H0C1 365 aa14.09□□□□□ -0.15
DDX41-215ENST00000512431 GMEB2Q9UKD1 530 aa14.09□□□□□ -0.15
DDX41-215ENST00000512431 SMG5Q9UPR3 1016 aaKnown RBP14.09□□□□□ -0.15
DDX41-215ENST00000512431 CACNA1BQ00975 2339 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 DDX11L8A8MPP1 907 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 MSH4O15457 936 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 MAFO75444 373 aaPredicted RBP14.08□□□□□ -0.16
DDX41-215ENST00000512431 PAPLNO95428 1278 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 ADRB1P08588 477 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
DDX41-215ENST00000512431 ZBTB41Q5SVQ8 909 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 CREB3L3Q68CJ9 461 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 GLYCTKQ8IVS8 523 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 KSR1Q8IVT5 923 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 COLGALT2Q8IYK4 626 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 ZBTB44Q8NCP5 570 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 NELL2Q99435 816 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 SH2D3AQ9BRG2 576 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 EPC1Q9H2F5 836 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 UNC45AQ9H3U1 944 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 MARCH5Q9NX47 278 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 CDH7Q9ULB5 785 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 RAB23Q9ULC3 237 aa14.08□□□□□ -0.16
DDX41-215ENST00000512431 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
DDX41-215ENST00000512431 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 ZMYND10O75800 440 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 NCBP1Q09161 790 aaKnown RBP14.07□□□□□ -0.16
DDX41-215ENST00000512431 COL9A3Q14050 684 aaPredicted RBP14.07□□□□□ -0.16
DDX41-215ENST00000512431 USP41Q3LFD5 358 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 SRGAP1Q7Z6B7 1085 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 GRASPQ7Z6J2 395 aaPredicted RBP14.07□□□□□ -0.16
DDX41-215ENST00000512431 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
DDX41-215ENST00000512431 SLC7A3Q8WY07 619 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 FGF14Q92915 247 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 LENG9Q96B70 501 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 RPP25Q9BUL9 199 aaKnown RBP14.07□□□□□ -0.16
DDX41-215ENST00000512431 DDX23Q9BUQ8 820 aaKnown RBP14.07□□□□□ -0.16
DDX41-215ENST00000512431 CHST7Q9NS84 486 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 COL4A3BPQ9Y5P4 624 aa14.07□□□□□ -0.16
DDX41-215ENST00000512431 KLF18A0A0U1RQI7 1052 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 LILRB5O75023 590 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 SRGAP2CP0DJJ0 459 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 USP11P51784 963 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 AKAP17AQ02040 695 aaKnown RBP14.06□□□□□ -0.16
DDX41-215ENST00000512431 NECTIN1Q15223 517 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 LIN9Q5TKA1 542 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 LILRA6Q6PI73 481 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 GPR65Q8IYL9 337 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 HACE1Q8IYU2 909 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 SLC5A5Q92911 643 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 CEP89Q96ST8 783 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 FAM126AQ9BYI3 521 aaPredicted RBP14.06□□□□□ -0.16
DDX41-215ENST00000512431 LSG1Q9H089 658 aaKnown RBP14.06□□□□□ -0.16
DDX41-215ENST00000512431 IFT122Q9HBG6 1241 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 LTB4R2Q9NPC1 389 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 MRPS17Q9Y2R5 130 aaKnown RBP14.06□□□□□ -0.16
DDX41-215ENST00000512431 MTF2Q9Y483 593 aaPredicted RBP14.06□□□□□ -0.16
DDX41-215ENST00000512431 FANCMQ8IYD8 2048 aa14.06□□□□□ -0.16
DDX41-215ENST00000512431 NCOR2Q9Y618 2525 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 ERLIN2O94905 339 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 EFEMP2O95967 443 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 CDC27P30260 824 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 NRLP54845 237 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 PPP2R5DQ14738 602 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 UBXN11Q5T124 520 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 DHX32Q7L7V1 743 aaKnown RBP14.05□□□□□ -0.16
DDX41-215ENST00000512431 PSPC1Q8WXF1 523 aaKnown RBP14.05□□□□□ -0.16
DDX41-215ENST00000512431 GAD1Q99259 594 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 PHF20Q9BVI0 1012 aa14.05□□□□□ -0.16
DDX41-215ENST00000512431 KMT2BQ9UMN6 2715 aaPredicted RBP14.05□□□□□ -0.16
DDX41-215ENST00000512431 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 DKC1O60832 514 aaKnown RBP eCLIP14.04□□□□□ -0.16
DDX41-215ENST00000512431 XYLBO75191 536 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 TADA2AO75478 443 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 PSMD10O75832 226 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 STBD1O95210 358 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 HNRNPA1P09651 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
DDX41-215ENST00000512431 CD72P21854 359 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 HOXA11P31270 313 aaPredicted RBP14.04□□□□□ -0.16
DDX41-215ENST00000512431 ADD1P35611 737 aaKnown RBP14.04□□□□□ -0.16
DDX41-215ENST00000512431 MLH1P40692 756 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 RPS9P46781 194 aaKnown RBP14.04□□□□□ -0.16
DDX41-215ENST00000512431 SCNN1GP51170 649 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 RCAN1P53805 252 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 PSMC5P62195 406 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 FGD1P98174 961 aa14.04□□□□□ -0.16
DDX41-215ENST00000512431 DSC1Q08554 894 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms