RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 KRT39Q6A163 491 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 B4GALNT4Q76KP1 1039 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 MAEAQ7L5Y9 396 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 USP37Q86T82 979 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 DDX42Q86XP3 938 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 RPUSD2Q8IZ73 545 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TMEM161BQ8NDZ6 487 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PARD3BQ8TEW8 1205 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ALG3Q92685 438 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 KIFAP3Q92845 792 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 MAF1Q9H063 256 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 WNT8AQ9H1J5 351 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 EPN3Q9H201 632 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 RAVER2Q9HCJ3 691 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 MYOZ2Q9NPC6 264 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PXMP2Q9NR77 195 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PKD2L1Q9P0L9 805 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TBX20Q9UMR3 447 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ATXN2Q99700 1313 aaKnown RBP9.96□□□□□ -0.81
CPNE4-210ENST00000512332 SLC16A4O15374 487 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 DKC1O60832 514 aaKnown RBP eCLIP9.96□□□□□ -0.82
CPNE4-210ENST00000512332 ZBED4O75132 1171 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CCNE2O96020 404 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CHRNB2P17787 502 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CNGA1P29973 690 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 ADSSP30520 456 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CHRNA3P32297 505 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 LSP1P33241 339 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 ABCD1P33897 745 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CCT5P48643 541 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 PEX5P50542 639 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 RTP1P59025 263 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF280AP59817 542 aaPredicted RBP9.96□□□□□ -0.82
CPNE4-210ENST00000512332 DR1Q01658 176 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 SNRNP35Q16560 246 aaKnown RBP9.96□□□□□ -0.82
CPNE4-210ENST00000512332 UGCGQ16739 394 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 PTPROQ16827 1216 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CPXCR1Q8N123 301 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 GPRASP2Q96D09 838 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 FAM81BQ96LP2 452 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 MFSD14AQ96MC6 490 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 TRERF1Q96PN7 1200 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 RMDN3Q96TC7 470 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 ZSWIM1Q9BR11 485 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 TMEM8AQ9HCN3 771 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 CTTNBP2NLQ9P2B4 639 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 PCYOX1Q9UHG3 505 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 NR2E1Q9Y466 385 aa9.96□□□□□ -0.82
CPNE4-210ENST00000512332 PODXLO00592 558 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 TRIM66O15016 1216 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ATP9AO75110 1047 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ERLIN2O94905 339 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 CYP1A2P05177 515 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 EIF2AK2P19525 551 aaKnown RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 CTNNA2P26232 953 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 NPTX2P47972 431 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 DMP1Q13316 513 aaPredicted RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 PDCLQ13371 301 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 XKR9Q5GH70 373 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 RNF207Q6ZRF8 634 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 OTUD6AQ7L8S5 288 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 VSIG10LQ86VR7 867 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 C3orf20Q8ND61 904 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 KCNN1Q92952 543 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 CD101Q93033 1021 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 KREMEN1Q96MU8 473 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 RUNDC3BQ96NL0 473 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 PCDHB18PQ96TA0 734 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 FMO2Q99518 471 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 MOV10L1Q9BXT6 1211 aaKnown RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ZDHHC18Q9NUE0 388 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 UVRAGQ9P2Y5 699 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 TCEAL9Q9UHQ7 104 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 KCNG1Q9UIX4 513 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 RASAL2Q9UJF2 1139 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 GGA2Q9UJY4 613 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 PCDHA10Q9Y5I2 948 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 A0A087WUV0 522 aaPredicted RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 MYO1FO00160 1098 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 PHF2O75151 1096 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ZC3H11AO75152 810 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ADRB2P07550 413 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 RXRBP28702 533 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 FLT3P36888 993 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 OAZ1P54368 228 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 DHX9Q08211 1270 aaKnown RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 PRPF4BQ13523 1007 aaKnown RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 CYP1B1Q16678 543 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 FAM102BQ5T8I3 360 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 CIAPIN1Q6FI81 312 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ANO5Q75V66 913 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 ENOSF1Q7L5Y1 443 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms