RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TEPSINQ96N21 525 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 NUP88Q99567 741 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 TLR9Q9NR96 1032 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 ING3Q9NXR8 418 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 NCDNQ9UBB6 729 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 SERPINB13Q9UIV8 391 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 NR2E1Q9Y466 385 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 RPTORQ8N122 1335 aa4.43□□□□□ -1.7
TRAPPC11-207ENST00000511409 OTOL1A6NHN0 477 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 CCDC154A6NI56 674 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 ARHGAP6O43182 974 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 AP1G1O43747 822 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 DTNBO60941 627 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 PHF2O75151 1096 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 TMEM127O75204 238 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 OFD1O75665 1012 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 TOX4O94842 621 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 HSPA6P17066 643 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 AKAP5P24588 427 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 BPIFB4P59827 614 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 GTF2H3Q13889 308 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 NFIXQ14938 502 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 MINDY4Q4G0A6 757 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 CCDC181Q5TID7 509 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 NXNQ6DKJ4 435 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 MIGA2Q7L4E1 593 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 TAS1R1Q7RTX1 841 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 RHOT1Q8IXI2 618 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 GRAMD1CQ8IYS0 662 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 MAGEB6Q8N7X4 407 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 ANKRD53Q8N9V6 530 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 LPPQ93052 612 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 HDAC10Q969S8 669 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 MBD6Q96DN6 1003 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 RPL10LQ96L21 214 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 C7orf25Q9BPX7 421 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 C12orf65Q9H3J6 166 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 C14orf93Q9H972 538 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 NMRK2Q9NPI5 230 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 JADE2Q9NQC1 790 aa4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 CTDP1Q9Y5B0 961 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-207ENST00000511409 FAM171A2A8MVW0 826 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 HTRA2O43464 458 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 PDCP20941 246 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 ECHS1P30084 290 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 KIR2DL3P43628 341 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 DUSP2Q05923 314 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 PPP3CAQ08209 521 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 TBR1Q16650 682 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 ZNF827Q17R98 1081 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 GFOD2Q3B7J2 385 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 ARHGAP29Q52LW3 1261 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 ZDHHC14Q8IZN3 488 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 MSL3Q8N5Y2 521 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 TTC8Q8TAM2 541 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 SNX33Q8WV41 574 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 C8orf48Q96LL4 319 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 AIFM3Q96NN9 605 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 GTPBP4Q9BZE4 634 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 SLC6A15Q9H2J7 730 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 ANLNQ9NQW6 1124 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 PUF60Q9UHX1 559 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 SCOCQ9UIL1 159 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 RCAN3Q9UKA8 241 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 LIMCH1Q9UPQ0 1083 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 PCDHA13Q9Y5I0 950 aa4.41□□□□□ -1.7
TRAPPC11-207ENST00000511409 VSTM5A8MXK1 200 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 NOBOXO60393 691 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 ENDOD1O94919 500 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 RPLP2P05387 115 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 POU2F2P09086 479 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 LPOP22079 712 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 RAC3P60763 192 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 IL10RAQ13651 578 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 ZNF267Q14586 743 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 C3orf36Q3SXR2 165 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 CCDC157Q569K6 752 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 GJC2Q5T442 439 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 PPP4R3AQ6IN85 833 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 ARHGEF18Q6ZSZ5 1173 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 USP45Q70EL2 814 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 EPM2AIP1Q7L775 607 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 PLEKHH3Q7Z736 793 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 LGI4Q8N135 537 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 PQLC1Q8N2U9 271 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 CAMKK1Q8N5S9 505 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 OR5M3Q8NGP4 307 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 OR2I1PQ8NGU4 316 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 ZNF480Q8WV37 535 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 KAT5Q92993 513 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 LRRC37BQ96QE4 947 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 MAP3K14Q99558 947 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 EPC1Q9H2F5 836 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 LDAHQ9H6V9 325 aa4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 CNOT11Q9UKZ1 510 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-207ENST00000511409 IPPQ9Y573 584 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms