RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 MICAL3Q7RTP6 2002 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 CCDC194A0A1B0GVG4 234 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
PDPN-209ENST00000510906 VTNP04004 478 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 SFNP31947 248 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 CLCN3P51790 818 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 NFX1Q12986 1120 aaKnown RBP9.67□□□□□ -0.86
PDPN-209ENST00000510906 PAK2Q13177 524 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 KIZQ2M2Z5 673 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 EPC2Q52LR7 807 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 MRPL14Q6P1L8 145 aaKnown RBP9.67□□□□□ -0.86
PDPN-209ENST00000510906 PIK3AP1Q6ZUJ8 805 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 MIER3Q7Z3K6 550 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 NEK8Q86SG6 692 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 LRRC71Q8N4P6 559 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 WASF1Q92558 559 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 TMX1Q9H3N1 280 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 RC3H2Q9HBD1 1191 aaKnown RBP9.67□□□□□ -0.86
PDPN-209ENST00000510906 ERVK-5Q9HDB9 667 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 KLK14Q9P0G3 267 aa9.67□□□□□ -0.86
PDPN-209ENST00000510906 NOC2LQ9Y3T9 749 aaKnown RBP9.67□□□□□ -0.86
PDPN-209ENST00000510906 SIP14410 1827 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 ADGRA3Q8IWK6 1321 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 TMEM150BA6NC51 233 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 MAGEB2O15479 319 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 MGEA5O60502 916 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 RPS6KA5O75582 802 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 STBD1O95210 358 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 IBSPP21815 317 aaPredicted RBP9.66□□□□□ -0.86
PDPN-209ENST00000510906 TFF2Q03403 129 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 C8orf34Q49A92 452 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 PPP4R3AQ6IN85 833 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 EFCAB12Q6NXP0 572 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 TMEM192Q8IY95 271 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 FIBCD1Q8N539 461 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 LINC01465Q8N7H1 131 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 RDM1Q8NG50 284 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 ATXN2LQ8WWM7 1075 aaKnown RBP9.66□□□□□ -0.86
PDPN-209ENST00000510906 TNFRSF25Q93038 417 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 ZNF668Q96K58 619 aaPredicted RBP9.66□□□□□ -0.86
PDPN-209ENST00000510906 ASB2Q96Q27 587 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 OSMRQ99650 979 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 FTHL17Q9BXU8 183 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 NRBP2Q9NSY0 501 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 CEP131Q9UPN4 1083 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 PKD1L2Q7Z442 2459 aa9.66□□□□□ -0.86
PDPN-209ENST00000510906 KAT6AQ92794 2004 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 CCNT1O60563 726 aaKnown RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 GPR32O75388 356 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 DGKIO75912 1065 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 LINC00271P0C7V0 271 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 GCFC2P16383 781 aaKnown RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 CTNNB1P35222 781 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 KRT2P35908 639 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 GATMP50440 423 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 CRYBB1P53674 252 aaPredicted RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 NLRP11P59045 1033 aaKnown RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 MRPS5P82675 430 aaKnown RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 GPM6BQ13491 265 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 BTG3Q14201 252 aaPredicted RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 DSC3Q14574 896 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 TARBP2Q15633 366 aaKnown RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 MTERF2Q49AM1 385 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 XKR3Q5GH77 459 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 FAM228AQ86W67 206 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 ATCAYQ86WG3 371 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 GJD3Q8N144 294 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 HAS1Q92839 578 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 ALKBH8Q96BT7 664 aaKnown RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 ZNF689Q96CS4 500 aaPredicted RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 DMRTB1Q96MA1 342 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 SAMD11Q96NU1 681 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 MAP7D2Q96T17 732 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 SH2D3AQ9BRG2 576 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 LMCD1Q9NZU5 365 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 KIAA1522Q9P206 1035 aaPredicted RBP9.65□□□□□ -0.86
PDPN-209ENST00000510906 VAV3Q9UKW4 847 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 ST3GAL5Q9UNP4 418 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 AKT3Q9Y243 479 aa9.65□□□□□ -0.86
PDPN-209ENST00000510906 COL4A4P53420 1690 aaPredicted RBP9.64□□□□□ -0.87
PDPN-209ENST00000510906 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 BTBD18B2RXH4 712 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 H3BNC9 293 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 GPR182O15218 404 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 MMP1P03956 469 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 BMP2P12643 396 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 TMOD1P28289 359 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 BMPR1AP36894 532 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
PDPN-209ENST00000510906 TBC1D8BQ0IIM8 1120 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 PPP2R5CQ13362 524 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 DRP2Q13474 957 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 HIF1AQ16665 826 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 PAN2Q504Q3 1202 aaKnown RBP9.64□□□□□ -0.87
PDPN-209ENST00000510906 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms