RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 DNA2P51530 1060 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
BRIX1-203ENST00000510834 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 BICD1Q96G01 975 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 MS4A14Q96JA4 679 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
BRIX1-203ENST00000510834 ELP3Q9H9T3 547 aa11.31□□□□□ -0.6
BRIX1-203ENST00000510834 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 CXCL11O14625 94 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 ATP4AP20648 1035 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 COPB2P35606 906 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 GPC3P51654 580 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 DMTNQ08495 405 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 FSTL1Q12841 308 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 TERF2Q15554 542 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 DLK2Q6UY11 383 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 TAS1R3Q7RTX0 852 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 PEX26Q7Z412 305 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 CCDC127Q96BQ5 260 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SCN4AP35499 1836 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 ANKRD62A6NC57 917 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 KCNK3O14649 394 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 KIAA0391O15091 583 aaKnown RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 NF2P35240 595 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 RFC5P40937 340 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 MFAP3P55082 362 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 NEDD9Q14511 834 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 DAAM2Q86T65 1068 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 FBXL13Q8NEE6 735 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SLC20A1Q8WUM9 679 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SHC3Q92529 594 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 MPHOSPH6Q99547 160 aaKnown RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 NIFKQ9BYG3 293 aaKnown RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 PORCNQ9H237 461 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 KIAA1586Q9HCI6 787 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 PDE11AQ9HCR9 933 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 SEPT11Q9NVA2 429 aaKnown RBP11.3□□□□□ -0.6
BRIX1-203ENST00000510834 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
BRIX1-203ENST00000510834 H3BQF6 201 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 PEX10O60683 326 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 ZMYND10O75800 440 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 SLC25A27O95847 323 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 ZBTB48P10074 688 aaPredicted RBP11.29□□□□□ -0.6
BRIX1-203ENST00000510834 MYBL2P10244 700 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 NAMPTP43490 491 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 LIG4P49917 911 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 TNNC1P63316 161 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 STRN3Q13033 797 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 PPIL2Q13356 520 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 FAM160B1Q5W0V3 765 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 PALB2Q86YC2 1186 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 FAM71AQ8IYT1 594 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 PPM1KQ8N3J5 372 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
BRIX1-203ENST00000510834 CDCA5Q96FF9 252 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 NT5C1BQ96P26 610 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 SELENOOQ9BVL4 669 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 ASCC2Q9H1I8 757 aaPredicted RBP11.29□□□□□ -0.6
BRIX1-203ENST00000510834 GOLPH3Q9H4A6 298 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 DMGDHQ9UI17 866 aaKnown RBP11.29□□□□□ -0.6
BRIX1-203ENST00000510834 ZSWIM8A7E2V4 1837 aa11.29□□□□□ -0.6
BRIX1-203ENST00000510834 A0A0U1RQG5 324 aaPredicted RBP11.28□□□□□ -0.6
BRIX1-203ENST00000510834 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 EXTL3O43909 919 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
BRIX1-203ENST00000510834 CNMDO75829 334 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 PIGRP01833 764 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 TGFB3P10600 412 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 ABCB4P21439 1286 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 HADHBP55084 474 aaKnown RBP11.28□□□□□ -0.6
BRIX1-203ENST00000510834 NT5DC3Q86UY8 548 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 RHOT2Q8IXI1 618 aa11.28□□□□□ -0.6
BRIX1-203ENST00000510834 GSPT2Q8IYD1 628 aaKnown RBP11.28□□□□□ -0.6
BRIX1-203ENST00000510834 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms