RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
COPS4-208ENST00000510801 ST6GALNAC4Q9H4F1 302 aa13.72□□□□□ -0.21
COPS4-208ENST00000510801 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
COPS4-208ENST00000510801 PTPRHQ9HD43 1115 aa13.72□□□□□ -0.21
COPS4-208ENST00000510801 COG5Q9UP83 839 aa13.72□□□□□ -0.21
COPS4-208ENST00000510801 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
COPS4-208ENST00000510801 GRM6O15303 877 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 MAPTP10636 758 aaKnown RBP13.71□□□□□ -0.21
COPS4-208ENST00000510801 ITGA4P13612 1032 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 NCKAP1LP55160 1127 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 MCM6Q14566 821 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
COPS4-208ENST00000510801 NT5DC1Q5TFE4 455 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 RRAGBQ5VZM2 374 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 GPBP1Q86WP2 473 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 SLC39A11Q8N1S5 342 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
COPS4-208ENST00000510801 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 ZNF558Q96NG5 402 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.21
COPS4-208ENST00000510801 REEP2Q9BRK0 252 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 TMEM175Q9BSA9 504 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 NSUN3Q9H649 340 aaKnown RBP13.71□□□□□ -0.21
COPS4-208ENST00000510801 PARVGQ9HBI0 331 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 TBC1D13Q9NVG8 400 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
COPS4-208ENST00000510801 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
COPS4-208ENST00000510801 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 FSD2A1L4K1 749 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 FRMD3A2A2Y4 597 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 ARL5CA6NH57 179 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 FGF18O76093 207 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 PIGRP01833 764 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 EDN1P05305 212 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
COPS4-208ENST00000510801 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 DSC1Q08554 894 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 E2F4Q16254 413 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 SPECC1Q5M775 1068 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 ATF7IP2Q5U623 682 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 ZPBP2Q6X784 338 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 RNF169Q8NCN4 708 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 LPPQ93052 612 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 FIZ1Q96SL8 496 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 PLIN2Q99541 437 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 KIFC3Q9BVG8 833 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 MRPL4Q9BYD3 311 aaKnown RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 MAGEF1Q9HAY2 307 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
COPS4-208ENST00000510801 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 REV3LO60673 3130 aa13.7□□□□□ -0.22
COPS4-208ENST00000510801 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.69□□□□□ -0.22
COPS4-208ENST00000510801 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 ABLIM1O14639 778 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 FSCN2O14926 492 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 GALTP07902 379 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 BCAR1P56945 870 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 SHC4Q6S5L8 630 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
COPS4-208ENST00000510801 POF1BQ8WVV4 589 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 NXF3Q9H4D5 531 aaKnown RBP13.69□□□□□ -0.22
COPS4-208ENST00000510801 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 NGRNQ9NPE2 291 aaKnown RBP13.69□□□□□ -0.22
COPS4-208ENST00000510801 KBTBD4Q9NVX7 518 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
COPS4-208ENST00000510801 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
COPS4-208ENST00000510801 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
COPS4-208ENST00000510801 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
COPS4-208ENST00000510801 A0A087X0B3 334 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 SFI1A8K8P3 1242 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 TRAK2O60296 914 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 TOM1L1O75674 476 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 NPTXRO95502 500 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 MCF2P10911 925 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 DNAJB1P25685 340 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 GTF2BQ00403 316 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 KRT17Q04695 432 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
COPS4-208ENST00000510801 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 SPOUT1Q5T280 376 aaKnown RBP13.68□□□□□ -0.22
COPS4-208ENST00000510801 RESP18Q5W5W9 173 aa13.68□□□□□ -0.22
COPS4-208ENST00000510801 HAUS6Q7Z4H7 955 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms