RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 COPB2P35606 906 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 CHRNDQ07001 517 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 KLF1Q13351 362 aaPredicted RBP5.89□□□□□ -1.47
NEK1-204ENST00000509912 SEC23AQ15436 765 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 CLEC16AQ2KHT3 1053 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 HP1BP3Q5SSJ5 553 aaPredicted RBP5.89□□□□□ -1.47
NEK1-204ENST00000509912 OVCH1Q7RTY7 1134 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.89□□□□□ -1.47
NEK1-204ENST00000509912 ELF4Q99607 663 aaPredicted RBP5.89□□□□□ -1.47
NEK1-204ENST00000509912 ALG1Q9BT22 464 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 COL4A6Q14031 1691 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 SIPA1L1O43166 1804 aa5.89□□□□□ -1.47
NEK1-204ENST00000509912 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GOLGA8AA7E2F4 631 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GOLGA8BA8MQT2 603 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 F8W735 103 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 DVL2O14641 736 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 SH3BP5O60239 455 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 NBNO60934 754 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 LTBRP36941 435 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 HNRNPUQ00839 825 aaKnown RBP eCLIP5.88□□□□□ -1.47
NEK1-204ENST00000509912 OS9Q13438 667 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 KIR3DS1Q14943 382 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 ZNF765Q7L2R6 523 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 IFNL3Q8IZI9 196 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 SVOPQ8N4V2 548 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 DIO2Q92813 273 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 KAZALD1Q96I82 304 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 FBXL18Q96ME1 805 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 ACO2Q99798 780 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 ANO3Q9BYT9 981 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GNL3LQ9NVN8 582 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 MORF4L1Q9UBU8 362 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 NAP1L2Q9ULW6 460 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 DIS3Q9Y2L1 958 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 ATAD5Q96QE3 1844 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GOLGA6CA6NDK9 693 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GOLGA6BA6NDN3 693 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 EYA2O00167 538 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 WNT10BO00744 389 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 CPP00450 1065 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 LDHCP07864 332 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GOLGA6DP0CG33 693 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 BCRP11274 1271 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 CETPP11597 493 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 LMBR1LQ6UX01 489 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 SLC12A9Q9BXP2 914 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 SMURF1Q9HCE7 757 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 PRDM5Q9NQX1 630 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 TOMM22Q9NS69 142 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 GOLGA6AQ9NYA3 693 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 INVSQ9Y283 1065 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 UBE2Q2LH0YL09 131 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 TACR1P25103 407 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 RAC1P63000 192 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 RNF4P78317 190 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 IRF9Q00978 393 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 SRSF2Q01130 221 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 NRG1Q02297 640 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 RTP2Q5QGT7 225 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 ERO1BQ86YB8 467 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 MSL3Q8N5Y2 521 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 PPP1R35Q8TAP8 253 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 E2F7Q96AV8 911 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 FAM84BQ96KN1 310 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 ZNF341Q9BYN7 854 aa5.88□□□□□ -1.47
NEK1-204ENST00000509912 CELF4Q9BZC1 486 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 DHX36Q9H2U1 1008 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 GSX1Q9H4S2 264 aaPredicted RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 HERC5Q9UII4 1024 aaKnown RBP5.88□□□□□ -1.47
NEK1-204ENST00000509912 GPR75-ASB3A0A0A6YYF3 556 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 FAM170BA6NMN3 283 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 SCDO00767 359 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 USP2O75604 605 aaPredicted RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 WDHD1O75717 1129 aaPredicted RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 FOSP01100 380 aaPredicted RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 LTFP02788 710 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 SYPP08247 313 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 HOXA7P31268 230 aaPredicted RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 HIBADHP31937 336 aaKnown RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 CAP2P40123 477 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 HSP90AB4PQ58FF6 505 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 FAM109BQ6ICB4 259 aaPredicted RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 RCSD1Q6JBY9 416 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 IGF2-ASQ6U949 168 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 FASTKD5Q7L8L6 764 aaKnown RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 UTP4Q969X6 686 aaKnown RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 HSPBAP1Q96EW2 488 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 TEKT5Q96M29 485 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 MARCH2Q9P0N8 246 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 TCFL5Q9UL49 500 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 PLXNB2O15031 1838 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 TBC1D8O95759 1140 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 IFIT1P09914 478 aaKnown RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 HOXD10P28358 340 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 ETV3P41162 512 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 KIF11P52732 1056 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 CCDC57Q2TAC2 916 aa5.87□□□□□ -1.47
NEK1-204ENST00000509912 IFIT1BQ5T764 474 aaKnown RBP5.87□□□□□ -1.47
NEK1-204ENST00000509912 NXNQ6DKJ4 435 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms