RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PGBD4Q96DM1 585 aa17.78■□□□□ 0.44
RAB40C-202ENST00000509637 TMEM175Q9BSA9 504 aa17.78■□□□□ 0.44
RAB40C-202ENST00000509637 B4GALT5O43286 388 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 CCNT1O60563 726 aaKnown RBP17.77■□□□□ 0.44
RAB40C-202ENST00000509637 PFKFB2O60825 505 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 SPATA31D3P0C874 917 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 GIT2Q14161 759 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 XKR9Q5GH70 373 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 SPATA31D4Q6ZUB0 917 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 ST13P5Q8NFI4 369 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-202ENST00000509637 SLC7A3Q8WY07 619 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 ZNF707Q96C28 371 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-202ENST00000509637 RPS6KC1Q96S38 1066 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 HSD17B14Q9BPX1 270 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 HERC2P3Q9BVR0 1158 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 SLKQ9H2G2 1235 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-202ENST00000509637 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 KCNK12Q9HB15 430 aa17.77■□□□□ 0.44
RAB40C-202ENST00000509637 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 ARL5CA6NH57 179 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 TTLL13PA6NNM8 815 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 SOD2P04179 222 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 IGFBP6P24592 240 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-202ENST00000509637 ARL2P36404 184 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 MLH1P40692 756 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 RFC5P40937 340 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 SCNN1GP51170 649 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 MBTD1Q05BQ5 628 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 CAPSQ13938 189 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-202ENST00000509637 FAM177A1Q8N128 213 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-202ENST00000509637 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 MYADMQ96S97 322 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 EIF2AK1Q9BQI3 630 aaKnown RBP17.76■□□□□ 0.43
RAB40C-202ENST00000509637 JPH2Q9BR39 696 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-202ENST00000509637 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 RXFP1Q9HBX9 757 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 MAN1C1Q9NR34 630 aa17.76■□□□□ 0.43
RAB40C-202ENST00000509637 RIF1Q5UIP0 2472 aaKnown RBP17.76■□□□□ 0.43
RAB40C-202ENST00000509637 STK36Q9NRP7 1315 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 TBX3O15119 743 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
RAB40C-202ENST00000509637 ITGA4P13612 1032 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 ARF4P18085 180 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-202ENST00000509637 GLRA2P23416 452 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 NBL1P41271 181 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 PPFIBP1Q86W92 1011 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 TPH2Q8IWU9 490 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 URGCPQ8TCY9 931 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 RSPH1Q8WYR4 309 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 PAAF1Q9BRP4 392 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 NXF3Q9H4D5 531 aaKnown RBP17.75■□□□□ 0.43
RAB40C-202ENST00000509637 MRPL17Q9NRX2 175 aaKnown RBP17.75■□□□□ 0.43
RAB40C-202ENST00000509637 CHST7Q9NS84 486 aa17.75■□□□□ 0.43
RAB40C-202ENST00000509637 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 CCDC195A0A1B0GUA6 201 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 KRBA1A5PL33 1030 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 PRR23AA6NEV1 266 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 PAPLNO95428 1278 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 GCFC2P16383 781 aaKnown RBP17.74■□□□□ 0.43
RAB40C-202ENST00000509637 AKAP5P24588 427 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 OR1G1P47890 313 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 CLCN5P51795 746 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 AK2P54819 239 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 ST3GAL1Q11201 340 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 BMS1Q14692 1282 aaKnown RBP17.74■□□□□ 0.43
RAB40C-202ENST00000509637 LILRA6Q6PI73 481 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 CMASQ8NFW8 434 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-202ENST00000509637 MTRQ99707 1265 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 APOL6Q9BWW8 343 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 CSRNP2Q9H175 543 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 KANSL3Q9P2N6 904 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 DUSP12Q9UNI6 340 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
RAB40C-202ENST00000509637 FAM186AA6NE01 2351 aa17.74■□□□□ 0.43
RAB40C-202ENST00000509637 MYO15AQ9UKN7 3530 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 MTCL1Q9Y4B5 1905 aaKnown RBP17.73■□□□□ 0.43
RAB40C-202ENST00000509637 ASAP2O43150 1006 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 LYPLA2O95372 231 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 EDN1P05305 212 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 RPL17P18621 184 aaKnown RBP17.73■□□□□ 0.43
RAB40C-202ENST00000509637 NUBP1P53384 320 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 DSG1Q02413 1049 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 TDGQ13569 410 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 C15orf39Q6ZRI6 1047 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 CCDC149Q6ZUS6 474 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 FRMD5Q7Z6J6 570 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 TMEM87AQ8NBN3 555 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 FLCNQ8NFG4 579 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 PIGOQ8TEQ8 1089 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 SNX27Q96L92 541 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 WDR6Q9NNW5 1121 aaKnown RBP17.73■□□□□ 0.43
RAB40C-202ENST00000509637 GPRC5CQ9NQ84 441 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
RAB40C-202ENST00000509637 ORC3Q9UBD5 711 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms