RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 SPATA32Q96LK8 384 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 TFIP11Q9UBB9 837 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 DNAJB4Q9UDY4 337 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 ZDBF2Q9HCK1 2354 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 CARNS1A5YM72 827 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 ZBTB39O15060 712 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 TRAK2O60296 914 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 B4GALT3O60512 393 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 SP100P23497 879 aaPredicted RBP16.22■□□□□ 0.19
HMGCL-208ENST00000509389 HOXA11P31270 313 aaPredicted RBP16.22■□□□□ 0.19
HMGCL-208ENST00000509389 SLC11A1P49279 550 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 NHLH1Q02575 133 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 CYP4A11Q02928 519 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 RNASELQ05823 741 aaKnown RBP16.22■□□□□ 0.19
HMGCL-208ENST00000509389 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
HMGCL-208ENST00000509389 EMC2Q15006 297 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 SLC39A14Q15043 492 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 UBXN11Q5T124 520 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 MRPL10Q7Z7H8 261 aaKnown RBP16.22■□□□□ 0.19
HMGCL-208ENST00000509389 ALYREFQ86V81 257 aaKnown RBP16.22■□□□□ 0.19
HMGCL-208ENST00000509389 ZNF280BQ86YH2 543 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 KCNG4Q8TDN1 519 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 TCP11Q8WWU5 503 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 PBXIP1Q96AQ6 731 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 GBP3Q9H0R5 595 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 ADAM7Q9H2U9 754 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 ZSWIM4Q9H7M6 989 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 IRAK3Q9Y616 596 aa16.22■□□□□ 0.19
HMGCL-208ENST00000509389 MYO10Q9HD67 2058 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.21■□□□□ 0.19
HMGCL-208ENST00000509389 ASAP2O43150 1006 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 GAS2O43903 313 aaKnown RBP16.21■□□□□ 0.19
HMGCL-208ENST00000509389 PPP6R2O75170 966 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 GADD45BO75293 160 aaPredicted RBP16.21■□□□□ 0.19
HMGCL-208ENST00000509389 SLITRK3O94933 977 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 CTSAP10619 480 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
HMGCL-208ENST00000509389 ITIH3Q06033 890 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 SIGLEC14Q08ET2 396 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 NBR1Q14596 966 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 CES5AQ6NT32 575 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 TPH2Q8IWU9 490 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 VN1R3Q9BXE9 311 aa16.21■□□□□ 0.19
HMGCL-208ENST00000509389 DDHD2O94830 711 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 AFF1P51825 1210 aaKnown RBP16.2■□□□□ 0.18
HMGCL-208ENST00000509389 GIT2Q14161 759 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 SF3A1Q15459 793 aaKnown RBP16.2■□□□□ 0.18
HMGCL-208ENST00000509389 RNF149Q8NC42 400 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 URGCPQ8TCY9 931 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 SLC22A17Q8WUG5 538 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 NECTIN4Q96NY8 510 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 MTRQ99707 1265 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 POMKQ9H5K3 350 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 RSAD1Q9HA92 442 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 XPNPEP1Q9NQW7 623 aa16.2■□□□□ 0.18
HMGCL-208ENST00000509389 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 A0A1W2PQ27 194 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 A0A1W2PQ64 194 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 A0A1W2PQD8 194 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 WNT7AO00755 349 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 BMP15O95972 392 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 WEE2P0C1S8 567 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 EPCAMP16422 314 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 ORC2Q13416 577 aaPredicted RBP16.19■□□□□ 0.18
HMGCL-208ENST00000509389 RARS2Q5T160 578 aaKnown RBP16.19■□□□□ 0.18
HMGCL-208ENST00000509389 KANK3Q6NY19 840 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 C12orf76Q8N812 135 aaPredicted RBP16.19■□□□□ 0.18
HMGCL-208ENST00000509389 ASIC4Q96FT7 647 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 HSD17B14Q9BPX1 270 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 EIF2AK1Q9BQI3 630 aaKnown RBP16.19■□□□□ 0.18
HMGCL-208ENST00000509389 DZANK1Q9NVP4 752 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
HMGCL-208ENST00000509389 PCDHA12Q9UN75 941 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 NR2E1Q9Y466 385 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 PCDHB6Q9Y5E3 794 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 WDFY4Q6ZS81 3184 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 KMT2EQ8IZD2 1858 aa16.19■□□□□ 0.18
HMGCL-208ENST00000509389 FAM237AA0A1B0GTK4 181 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 C2CD4DB7Z1M9 353 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 SPTLC2O15270 562 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 MTHFRP42898 656 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 PTENP60484 403 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 PTPN14Q15678 1187 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
HMGCL-208ENST00000509389 IER5LQ5T953 404 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 SUGP1Q8IWZ8 645 aaKnown RBP16.18■□□□□ 0.18
HMGCL-208ENST00000509389 FBXL6Q8N531 539 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 SMG8Q8ND04 991 aaKnown RBP16.18■□□□□ 0.18
HMGCL-208ENST00000509389 RIPOR3Q96MK2 946 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 TMEM175Q9BSA9 504 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 KANSL3Q9P2N6 904 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
HMGCL-208ENST00000509389 TSPAN1O60635 241 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 ERLIN2O94905 339 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 LYPLA2O95372 231 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms