RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 CTSAP10619 480 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 GCFC2P16383 781 aaKnown RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 YWHABP31946 246 aaKnown RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 MRE11P49959 708 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 POLGP54098 1239 aaPredicted RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 VCPP55072 806 aaKnown RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 CYP4A11Q02928 519 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 SIGLEC14Q08ET2 396 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 CTTNQ14247 550 aaKnown RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 EMC2Q15006 297 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 PTPN14Q15678 1187 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 AMHR2Q16671 573 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 NCAPH2Q6IBW4 605 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 CPLX2Q6PUV4 134 aaKnown RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 GLB1LQ6UWU2 654 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 TAS1R1Q7RTX1 841 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 FERMT3Q86UX7 667 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 SLC7A3Q8WY07 619 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 CASP10Q92851 521 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 GTF3C6Q969F1 213 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 TMEM169Q96HH4 297 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 CEP170P1Q96L14 293 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 EIF2AQ9BY44 585 aaKnown RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 INO80BQ9C086 356 aaPredicted RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 GBP3Q9H0R5 595 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 MIOSQ9NXC5 875 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 ORC3Q9UBD5 711 aaPredicted RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 INPP5FQ9Y2H2 1132 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 PLXNA3P51805 1871 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 BTBD18B2RXH4 712 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 NRP1O14786 923 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 INPPL1O15357 1258 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 TSPAN1O60635 241 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 CDKL5O76039 1030 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 LYPLA2O95372 231 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 CNPP09543 421 aaKnown RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 SPATA31C1P0DKV0 1188 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 SRGAP2BP0DMP2 458 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 SKIP12755 728 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 NCLP19338 710 aaKnown RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 ARL2P36404 184 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RFC5P40937 340 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RAB27AP51159 221 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 ANAPC15P60006 121 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 PTENP60484 403 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 ITIH3Q06033 890 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 DSC1Q08554 894 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 XKR9Q5GH70 373 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RARS2Q5T160 578 aaKnown RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 SRGAP1Q7Z6B7 1085 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 IFNLR1Q8IU57 520 aaPredicted RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RNF168Q8IYW5 571 aaPredicted RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RNF149Q8NC42 400 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 KREMEN2Q8NCW0 462 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 NSUN7Q8NE18 718 aaKnown RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 GSTCDQ8NEC7 633 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 ASAP3Q8TDY4 903 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 PSPC1Q8WXF1 523 aaKnown RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RSPH1Q8WYR4 309 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 WNT2BQ93097 391 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZFP42Q96MM3 310 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 KLHL5Q96PQ7 755 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 MTMR9Q96QG7 549 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 EIF2AK1Q9BQI3 630 aaKnown RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 JPH2Q9BR39 696 aaPredicted RBP7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 TMEM60Q9H2L4 133 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZSWIM4Q9H7M6 989 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 RSAD1Q9HA92 442 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 MARCH5Q9NX47 278 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 HES2Q9Y543 173 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 PPME1Q9Y570 386 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 DOCK6Q96HP0 2047 aa7.18□□□□□ -1.26
HMGN1P16-201ENST00000508308 TDRD15B5MCY1 1934 aaKnown RBP7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 DCHS1Q96JQ0 3298 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 DOCK8Q8NF50 2099 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 ARL5CA6NH57 179 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 B4GALT5O43286 388 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 N4BP1O75113 896 aaKnown RBP7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 POMCP01189 267 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 SSBP05455 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 ASGR2P07307 311 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 GLRA2P23416 452 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 AVPR2P30518 371 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 KRT2P35908 639 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 CLCN4P51793 760 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 RNASELQ05823 741 aaKnown RBP7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 MBTD1Q05BQ5 628 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 POU5F1BQ06416 359 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 CAPSQ13938 189 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 TPRNQ4KMQ1 711 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 KIAA0319Q5VV43 1072 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 KIAA1841Q6NSI8 718 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 TMC5Q6UXY8 1006 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 GPR149Q86SP6 731 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 TPH2Q8IWU9 490 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 COLGALT2Q8IYK4 626 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 SLFN12Q8IYM2 578 aa7.17□□□□□ -1.26
HMGN1P16-201ENST00000508308 PGBD4Q96DM1 585 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms