RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TNFSF13BQ9Y275 285 aa16.49■□□□□ 0.23
RNF4-210ENST00000508235 FGFR1P11362 822 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 ITGA4P13612 1032 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 ATF7P17544 494 aaPredicted RBP16.48■□□□□ 0.23
RNF4-210ENST00000508235 ERVK-21P61565 698 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 LRRC43Q8N309 656 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 FAM161BQ96MY7 647 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 C7orf25Q9BPX7 421 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 EIF2AQ9BY44 585 aaKnown RBP16.48■□□□□ 0.23
RNF4-210ENST00000508235 TRIM9Q9C026 710 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 ST6GALNAC4Q9H4F1 302 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 PDZD7Q9H5P4 517 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 AAASQ9NRG9 546 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 PANK4Q9NVE7 773 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 IPPQ9Y573 584 aa16.48■□□□□ 0.23
RNF4-210ENST00000508235 FRMD3A2A2Y4 597 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 CARNS1A5YM72 827 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 NPTXRO95502 500 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 MYL1P05976 194 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 NDUFA8P51970 172 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 ASIC1P78348 528 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 ALCAMQ13740 583 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 PAN2Q504Q3 1202 aaKnown RBP16.47■□□□□ 0.23
RNF4-210ENST00000508235 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
RNF4-210ENST00000508235 NT5DC1Q5TFE4 455 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 ZPBP2Q6X784 338 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 Q7L0L9 218 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 URGCPQ8TCY9 931 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 STAMQ92783 540 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
RNF4-210ENST00000508235 HVCN1Q96D96 273 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 CASD1Q96PB1 797 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 ACO2Q99798 780 aaKnown RBP16.47■□□□□ 0.23
RNF4-210ENST00000508235 MRPL44Q9H9J2 332 aaKnown RBP16.47■□□□□ 0.23
RNF4-210ENST00000508235 RSAD1Q9HA92 442 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 OLFML3Q9NRN5 406 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 MTMR10Q9NXD2 777 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
RNF4-210ENST00000508235 ACTN4O43707 911 aaKnown RBP16.46■□□□□ 0.23
RNF4-210ENST00000508235 GTF2BQ00403 316 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 GRIN2CQ14957 1233 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 CLLU1OSQ5K130 101 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
RNF4-210ENST00000508235 TAS1R3Q7RTX0 852 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 ZNF720Q7Z2F6 126 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 TMEM192Q8IY95 271 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 SMG8Q8ND04 991 aaKnown RBP16.46■□□□□ 0.23
RNF4-210ENST00000508235 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 HELQQ8TDG4 1101 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 ARNTL2Q8WYA1 636 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 BICD1Q96G01 975 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 GAS2L1Q99501 681 aaPredicted RBP16.46■□□□□ 0.23
RNF4-210ENST00000508235 TCHPQ9BT92 498 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 TARS2Q9BW92 718 aaKnown RBP16.46■□□□□ 0.23
RNF4-210ENST00000508235 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 TBX20Q9UMR3 447 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 GIT1Q9Y2X7 761 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
RNF4-210ENST00000508235 KIAA1671Q9BY89 1806 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 ZMYM2Q9UBW7 1377 aa16.46■□□□□ 0.23
RNF4-210ENST00000508235 PVALEFA0A1B0GWK0 134 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 C5orf67F2Z3F1 127 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 TOM1L1O75674 476 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 ARHGEF15O94989 841 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 RB1P06400 928 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 LAG3P18627 525 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 BMPR1AP36894 532 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 AFMP43652 599 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 LIG4P49917 911 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 GATMP50440 423 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 LONRF3Q496Y0 759 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 MPZL3Q6UWV2 235 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 AGMOQ6ZNB7 445 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 CDR2LQ86X02 465 aaPredicted RBP16.45■□□□□ 0.22
RNF4-210ENST00000508235 LPPQ93052 612 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 FIZ1Q96SL8 496 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 NXF3Q9H4D5 531 aaKnown RBP16.45■□□□□ 0.22
RNF4-210ENST00000508235 CERS4Q9HA82 394 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 EXOC7Q9UPT5 735 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 PCDHB13Q9Y5F0 798 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 PCDHB12Q9Y5F1 795 aa16.45■□□□□ 0.22
RNF4-210ENST00000508235 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
RNF4-210ENST00000508235 HNRNPDLO14979 420 aaKnown RBP16.44■□□□□ 0.22
RNF4-210ENST00000508235 CLDN3O15551 220 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 OFD1O75665 1012 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 ZNF202O95125 648 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 GCNT3O95395 438 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 PIGRP01833 764 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 EDN1P05305 212 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 MCF2P10911 925 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 NMT1P30419 496 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms