RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 C6orf50Q9HD87 102 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 MRPL17Q9NRX2 175 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 FAM105AQ9NUU6 356 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 SUCLA2Q9P2R7 463 aaPredicted RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 FAN1Q9Y2M0 1017 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 FAM186AA6NE01 2351 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 CLUHO75153 1309 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 DMDP11532 3685 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 hCG_1984214I3L0E3 225 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 NRP1O14786 923 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 INPPL1O15357 1258 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 N4BP1O75113 896 aaKnown RBP6.47□□□□□ -1.37
GYPB-208ENST00000507009 LRRN2O75325 713 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 OFD1O75665 1012 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 RFPL2O75678 378 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 DDHD2O94830 711 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 ALDH2P05091 517 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 URODP06132 367 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 CYP3A4P08684 503 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 SKIP12755 728 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 CPA1P15085 419 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 AFF1P51825 1210 aaKnown RBP6.47□□□□□ -1.37
GYPB-208ENST00000507009 AKAP17AQ02040 695 aaKnown RBP6.47□□□□□ -1.37
GYPB-208ENST00000507009 FUT2Q10981 343 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 NONOQ15233 471 aaKnown RBP eCLIP6.47□□□□□ -1.37
GYPB-208ENST00000507009 PFKFB3Q16875 520 aaPredicted RBP6.47□□□□□ -1.37
GYPB-208ENST00000507009 LRCH2Q5VUJ6 765 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 FAM43BQ6ZT52 329 aaPredicted RBP6.47□□□□□ -1.37
GYPB-208ENST00000507009 TAS1R1Q7RTX1 841 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 MIER3Q7Z3K6 550 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 SGMS1Q86VZ5 419 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 SLC44A3Q8N4M1 653 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 ZNF713Q8N859 430 aaPredicted RBP6.47□□□□□ -1.37
GYPB-208ENST00000507009 PHKBQ93100 1093 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 PGBD4Q96DM1 585 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 B3GALT6Q96L58 329 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 MYADMQ96S97 322 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 IGSF9Q9P2J2 1179 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 SIT1Q9Y3P8 196 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 PCDHB2Q9Y5E7 798 aa6.47□□□□□ -1.37
GYPB-208ENST00000507009 COL4A3Q01955 1670 aa6.46□□□□□ -1.37
GYPB-208ENST00000507009 F8W810 466 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 MSH4O15457 936 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 TEX28O15482 410 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 KRT37O76014 449 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 GLUD1P00367 558 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 ADH1AP07327 375 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 SP9P0CG40 484 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 SRGAP2CP0DJJ0 459 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 SRFP11831 508 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 JAK3P52333 1124 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 PUM1Q14671 1186 aaKnown RBP eCLIP6.46□□□□□ -1.38
GYPB-208ENST00000507009 UBXN2BQ14CS0 331 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 NECTIN1Q15223 517 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 RSPO4Q2I0M5 234 aaPredicted RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 ADCK5Q3MIX3 580 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 ELMSAN1Q6PJG2 1045 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 DCLRE1AQ6PJP8 1040 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 ZC3H14Q6PJT7 736 aaKnown RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 AGMOQ6ZNB7 445 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 C15orf39Q6ZRI6 1047 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 CCDC12Q8WUD4 166 aaPredicted RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 RUBCNQ92622 972 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 RABGGTAQ92696 567 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 STAMQ92783 540 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 CNTNAP3BQ96NU0 1288 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 SLC26A6Q9BXS9 759 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 CNTNAP3Q9BZ76 1288 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 INO80BQ9C086 356 aaPredicted RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 RSAD1Q9HA92 442 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 ARHGEF3Q9NR81 526 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 CHST12Q9NRB3 414 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 FAM217BQ9NTX9 383 aaPredicted RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 SPATA6Q9NWH7 488 aaPredicted RBP6.46□□□□□ -1.38
GYPB-208ENST00000507009 VPS54Q9P1Q0 977 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 NCDNQ9UBB6 729 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 WNT16Q9UBV4 365 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 IRAK3Q9Y616 596 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 DMXL1Q9Y485 3027 aa6.46□□□□□ -1.38
GYPB-208ENST00000507009 MIA3Q5JRA6 1907 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 KINO60870 393 aaKnown RBP6.45□□□□□ -1.38
GYPB-208ENST00000507009 ERLIN2O94905 339 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 TDP2O95551 362 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 SOD2P04179 222 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 ITGA4P13612 1032 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 PRKCSHP14314 528 aaPredicted RBP6.45□□□□□ -1.38
GYPB-208ENST00000507009 GNA11P29992 359 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 SFNP31947 248 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 GGCXP38435 758 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 MLH1P40692 756 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 GLUD2P49448 558 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 RAB27AP51159 221 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 NPEPPSP55786 919 aa6.45□□□□□ -1.38
GYPB-208ENST00000507009 NLRP5P59047 1200 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms