RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 DDX56Q9NY93 547 aaKnown RBP5.56□□□□□ -1.52
CALCOCO2-208ENST00000506971 KCNG1Q9UIX4 513 aa5.56□□□□□ -1.52
CALCOCO2-208ENST00000506971 HDAC5Q9UQL6 1122 aa5.56□□□□□ -1.52
CALCOCO2-208ENST00000506971 PCDHB6Q9Y5E3 794 aa5.56□□□□□ -1.52
CALCOCO2-208ENST00000506971 TARBP1Q13395 1621 aaKnown RBP5.56□□□□□ -1.52
CALCOCO2-208ENST00000506971 HECW1Q76N89 1606 aa5.56□□□□□ -1.52
CALCOCO2-208ENST00000506971 A0A0A6YYJ9 748 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 HMGB1P1B2RPK0 211 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 ELL2O00472 640 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 SUV39H1O43463 412 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 CLEC2LP0C7M8 214 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 MYCLP1P12525 358 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 LSP1P33241 339 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 DSG1Q02413 1049 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 LMBR1LQ6UX01 489 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 ZNF483Q8TF39 744 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 MFSD3Q96ES6 412 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 ZNF496Q96IT1 587 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 ZNF512Q96ME7 567 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 FEZ1Q99689 392 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 PCED1AQ9H1Q7 454 aa5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 SLKQ9H2G2 1235 aaPredicted RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 NOC2LQ9Y3T9 749 aaKnown RBP5.55□□□□□ -1.52
CALCOCO2-208ENST00000506971 URB2Q14146 1524 aaKnown RBP5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 GAPVD1Q14C86 1478 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 SNAPC4Q5SXM2 1469 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 PMS2P1A4D2B8 440 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 TGM5O43548 720 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 STC2O76061 302 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 FKBP9O95302 570 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 CASRP41180 1078 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 SMAD3P84022 425 aaKnown RBP5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 CD69Q07108 199 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 PPARAQ07869 468 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 MGAT5Q09328 741 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 SEPT7Q16181 437 aaKnown RBP5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 DDB1Q16531 1140 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 CCDC62Q6P9F0 684 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 KANSL1Q7Z3B3 1105 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 KIF18BQ86Y91 864 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 TMPRSS6Q8IU80 811 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 CDYL2Q8N8U2 506 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 SMC1BQ8NDV3 1235 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 GAB3Q8WWW8 586 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 USP7Q93009 1102 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 CCDC136Q96JN2 1154 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 CPPED1Q9BRF8 314 aaPredicted RBP5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 UBA5Q9GZZ9 404 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 NRDE2Q9H7Z3 1164 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 ADAMTS12P58397 1594 aa5.54□□□□□ -1.52
CALCOCO2-208ENST00000506971 GCC2Q8IWJ2 1684 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 NARSO43776 548 aaKnown RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 KDM1AO60341 852 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 PRAMEF4O60810 478 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 IPO13O94829 963 aaKnown RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 MAKP20794 623 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 NRG3P56975 720 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 FSTL1Q12841 308 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 DALRD3Q5D0E6 543 aaKnown RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 MFSD5Q6N075 450 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 HDGFL2Q7Z4V5 671 aaPredicted RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 CCDC146Q8IYE0 955 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 CACTINQ8WUQ7 758 aaKnown RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 PITHD1Q9GZP4 211 aaPredicted RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 GEMIN8Q9NWZ8 242 aaKnown RBP5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 PLAAQ9Y263 795 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 AKNAQ7Z591 1439 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 IQGAP2Q13576 1575 aa5.53□□□□□ -1.52
CALCOCO2-208ENST00000506971 SETD5Q9C0A6 1442 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 A0A0A6YYK5 440 aaPredicted RBP5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 PRSS38A1L453 326 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 PDE8AO60658 829 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 GAAP10253 952 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 ADCYAP1R1P41586 468 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 TBX4P57082 545 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 DUSP2Q05923 314 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 SPIDRQ14159 915 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 LRRC32Q14392 662 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 ATP13A4Q4VNC1 1196 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 ZBTB41Q5SVQ8 909 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 BROXQ5VW32 411 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 UBR7Q8N806 425 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 PIK3C3Q8NEB9 887 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 CPT1CQ8TCG5 803 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 STAG1Q8WVM7 1258 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 ST8SIA2Q92186 375 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 PMM1Q92871 262 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 MNTQ99583 582 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 SOX7Q9BT81 388 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 CEP72Q9P209 647 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 EIF2B4Q9UI10 523 aaKnown RBP5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 EDARQ9UNE0 448 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 SORCS3Q9UPU3 1222 aa5.52□□□□□ -1.53
CALCOCO2-208ENST00000506971 GRIN2BQ13224 1484 aa5.51□□□□□ -1.53
CALCOCO2-208ENST00000506971 MRC2Q9UBG0 1479 aa5.51□□□□□ -1.53
CALCOCO2-208ENST00000506971 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms