RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 RASAL2Q9UJF2 1139 aa6.4□□□□□ -1.38
CLDND1-213ENST00000506927 FBXL5Q9UKA1 691 aa6.4□□□□□ -1.38
CLDND1-213ENST00000506927 MINPP1Q9UNW1 487 aa6.4□□□□□ -1.38
CLDND1-213ENST00000506927 REXO2Q9Y3B8 237 aaKnown RBP6.4□□□□□ -1.38
CLDND1-213ENST00000506927 ATP6V0A2Q9Y487 856 aa6.4□□□□□ -1.38
CLDND1-213ENST00000506927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.4□□□□□ -1.38
CLDND1-213ENST00000506927 FAM169AQ9Y6X4 670 aa6.4□□□□□ -1.38
CLDND1-213ENST00000506927 ZNF831Q5JPB2 1677 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 A0A096LPE4 126 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 A0A1B0GUA9 196 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 A0A1W2PPZ6 126 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 TRAF5O00463 557 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SOX1O00570 391 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 TREHO43280 583 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 ADAM11O75078 769 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 WISP1O95388 367 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 NR1D1P20393 614 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 ATP5DP30049 168 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SLC8A1P32418 973 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 PDE6BP35913 854 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 TECP42680 631 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 NOP2P46087 812 aaKnown RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 CRKLP46109 303 aaKnown RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 USP11P51784 963 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 MNAT1P51948 309 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 PLCB3Q01970 1234 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 IKBKEQ14164 716 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 DSC3Q14574 896 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 IL17AQ16552 155 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 INF2Q27J81 1249 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SPRED3Q2MJR0 410 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 LETM2Q2VYF4 491 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 ODF2Q5BJF6 829 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 GPATCH4Q5T3I0 446 aaKnown RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 AGBL2Q5U5Z8 902 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 PDXDC1Q6P996 788 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 CCDC121Q6ZUS5 278 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 TMC4Q7Z404 712 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 FRMD5Q7Z6J6 570 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 AGGF1Q8N302 714 aaeCLIP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 ACTRT1Q8TDG2 376 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 MORC4Q8TE76 937 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 TBC1D5Q92609 795 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 RAD54LQ92698 747 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 STAMQ92783 540 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 CUL5Q93034 780 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 ATP6V1G3Q96LB4 118 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 ISCUQ9H1K1 167 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 EHD4Q9H223 541 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 OSGEPQ9NPF4 335 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 AGPAT5Q9NUQ2 364 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 BTG4Q9NY30 223 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 MAD2L2Q9UI95 211 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 MAPK8IP1Q9UQF2 711 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SIK3Q9Y2K2 1263 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 SUGT1Q9Y2Z0 365 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 UTP11Q9Y3A2 253 aaKnown RBP6.39□□□□□ -1.39
CLDND1-213ENST00000506927 PCDHGC5Q9Y5F6 944 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 MYO3BQ8WXR4 1341 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 PITPNM2Q9BZ72 1349 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 TOGARAM1Q9Y4F4 1720 aa6.39□□□□□ -1.39
CLDND1-213ENST00000506927 GTPBP10A4D1E9 387 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 PGRMC1O00264 195 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 NDC80O14777 642 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 CHUKO15111 745 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 TBX3O15119 743 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 KIF1CO43896 1103 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 N4BP1O75113 896 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 FSBPO95073 299 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 GGPS1O95749 300 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 FAM107AO95990 144 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 KRT18P05783 430 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 FERP16591 822 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 LMNB1P20700 586 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 MDH1P40925 334 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 GYG1P46976 350 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 CCT5P48643 541 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 GYS2P54840 703 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 C2orf54Q08AI8 447 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 KLHL30Q0D2K2 578 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 CETN1Q12798 172 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 STK4Q13043 487 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 DDB1Q16531 1140 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 PTPN21Q16825 1174 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 TXNRD1Q16881 649 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 RSPO4Q2I0M5 234 aaPredicted RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 KIAA0753Q2KHM9 967 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 EARS2Q5JPH6 523 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 FAM47AQ5JRC9 791 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 MIIPQ5JXC2 388 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 MEI1Q5TIA1 1274 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 INTS5Q6P9B9 1019 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 MOXD1Q6UVY6 613 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 C15orf52Q6ZUT6 534 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.38□□□□□ -1.39
CLDND1-213ENST00000506927 IQCKQ8N0W5 287 aa6.38□□□□□ -1.39
CLDND1-213ENST00000506927 SYNE4Q8N205 404 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms