RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 POTEB3A0JP26 581 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ZBTB42B2RXF5 422 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 MFAP3LO75121 409 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 NR3C2P08235 984 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 HOXA13P31271 388 aaPredicted RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SOX5P35711 763 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 CAP1Q01518 475 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 PCBP1Q15365 356 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ZRSR2Q15696 482 aaKnown RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 POTEBQ6S5H4 581 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SASS6Q6UVJ0 657 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF444Q8N0Y2 327 aaPredicted RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SLC16A10Q8TF71 515 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 KCNN1Q92952 543 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 KISS1RQ969F8 398 aaPredicted RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 LGR4Q9BXB1 951 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 DZANK1Q9NVP4 752 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 CTNND2Q9UQB3 1225 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 AFG3L2Q9Y4W6 797 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 DUSP10Q9Y6W6 482 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 TRANK1O15050 2925 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 NEMFO60524 1076 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 STX17P56962 302 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 MAPRE1Q15691 268 aaKnown RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 LONRF1Q17RB8 773 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 LETM2Q2VYF4 491 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 FAM209AQ5JX71 171 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SLFN13Q68D06 897 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SLC39A4Q6P5W5 647 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SYNE3Q6ZMZ3 975 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 RSRC2Q7L4I2 434 aaKnown RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 PAF1Q8N7H5 531 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ST13P5Q8NFI4 369 aaPredicted RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 GANQ9H2C0 597 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ANLNQ9NQW6 1124 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 WBP1LQ9NX94 342 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SLC5A4Q9NY91 659 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 HERC5Q9UII4 1024 aaKnown RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 TTC26A0AVF1 554 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 TMEM150BA6NC51 233 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 POTEB2H3BUK9 544 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 PPIP5K2O43314 1243 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 USP2O75604 605 aaPredicted RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 USP11P51784 963 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 JAM2P57087 298 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF460Q14592 562 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 STAT4Q14765 748 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ABCB5Q2M3G0 1257 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 PRAMEF18Q5VWM3 479 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 RIN3Q8TB24 985 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 PKNOX2Q96KN3 472 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 C12orf42Q96LP6 360 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 AK8Q96MA6 479 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 PRR14Q9BWN1 585 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 MTFR1LQ9H019 292 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 VCPKMTQ9H867 229 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 VAT1LQ9HCJ6 419 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 NGRNQ9NPE2 291 aaKnown RBP6.53□□□□□ -1.36
SCLT1-207ENST00000506233 TOMM22Q9NS69 142 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ABHD10Q9NUJ1 306 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ARHGAP20Q9P2F6 1191 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 IP6K2Q9UHH9 426 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 UBIAD1Q9Y5Z9 338 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 SNCAIPQ9Y6H5 919 aa6.53□□□□□ -1.36
SCLT1-207ENST00000506233 ADGRA3Q8IWK6 1321 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 SYNRGQ9UMZ2 1314 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 ERICH2A1L162 156 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 GRIN3BO60391 1043 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 H2AFXP16104 143 aaPredicted RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 KIF5BP33176 963 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 COG2Q14746 738 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 NONOQ15233 471 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 GPATCH4Q5T3I0 446 aaKnown RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 PDE12Q6L8Q7 609 aaKnown RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CCDC73Q6ZRK6 1079 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 RTKN2Q8IZC4 609 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 REXO1Q8N1G1 1221 aaKnown RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CENPOQ9BU64 300 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 ANO3Q9BYT9 981 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 LACRTQ9GZZ8 138 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 UNC45AQ9H3U1 944 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 HACL1Q9UJ83 578 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 PCDHGB3Q9Y5G1 929 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 MYH10P35580 1976 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 SKILP12757 684 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CASP14P31944 242 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 XRRA1Q6P2D8 792 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 POTEGQ6S5H5 508 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CABP7Q86V35 215 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CNTD1Q8N815 330 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
SCLT1-207ENST00000506233 CCDC17Q96LX7 622 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 EPC1Q9H2F5 836 aa6.52□□□□□ -1.37
SCLT1-207ENST00000506233 POLD4Q9HCU8 107 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms