RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 LMNB2Q03252 620 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 PFKFB3Q16875 520 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 LILRA6Q6PI73 481 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 RNF168Q8IYW5 571 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 REXO1Q8N1G1 1221 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 ZBTB44Q8NCP5 570 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 CHAMP1Q96JM3 812 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 RIT2Q99578 217 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 DDX23Q9BUQ8 820 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 AGPAT5Q9NUQ2 364 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 ZSCAN32Q9NX65 697 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 ZFHX4Q86UP3 3567 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 C2orf16Q68DN1 1984 aa12.98□□□□□ -0.33
CCHCR1-219ENST00000505392 KMT2BQ9UMN6 2715 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 F8W810 466 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 EDIL3O43854 480 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 EFEMP2O95967 443 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 SRGAP2CP0DJJ0 459 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 ITGA4P13612 1032 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 TGM1P22735 817 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 GNA11P29992 359 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 HOXA11P31270 313 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 PRKCQQ04759 706 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 UBXN11Q5T124 520 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 TSSK4Q6SA08 328 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 MIER3Q7Z3K6 550 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 GRASPQ7Z6J2 395 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 B3GALT6Q96L58 329 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 TEKT3Q9BXF9 490 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 OSBPL6Q9BZF3 934 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 UBN1Q9NPG3 1134 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 MIOSQ9NXC5 875 aa12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 SMG5Q9UPR3 1016 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 MYH9P35579 1960 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-219ENST00000505392 ACACBO00763 2458 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 ESYT2A0FGR8 921 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 LILRB5O75023 590 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 NR1I2O75469 434 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 ZMYND10O75800 440 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 C1RP00736 705 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 ADRB1P08588 477 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 RPL17P18621 184 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 SMG8Q8ND04 991 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 CCDC12Q8WUD4 166 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 SLC5A5Q92911 643 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 GAD1Q99259 594 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 COLEC11Q9BWP8 271 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 EPC1Q9H2F5 836 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 MINDY3Q9H8M7 445 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 FNIP2Q9P278 1114 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 CDH7Q9ULB5 785 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
CCHCR1-219ENST00000505392 ARL5CA6NH57 179 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 USP11P51784 963 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 NTHL1P78549 312 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 USP41Q3LFD5 358 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 RSPO2Q6UXX9 243 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 ANO5Q75V66 913 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 SRGAP1Q7Z6B7 1085 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 RDM1Q8NG50 284 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 PRPF31Q8WWY3 499 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 NELL1Q92832 810 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 FGF13Q92913 245 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 NELL2Q99435 816 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 PARD6AQ9NPB6 346 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 LTB4R2Q9NPC1 389 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 COL4A3BPQ9Y5P4 624 aa12.95□□□□□ -0.34
CCHCR1-219ENST00000505392 KLF18A0A0U1RQI7 1052 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 NCAM2O15394 837 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 PSMD10O75832 226 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 MLH1P40692 756 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 MAGEA9P43362 315 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 SCNN1GP51170 649 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 PFKPQ01813 784 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 DSC1Q08554 894 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 PLA2G4FQ68DD2 849 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms