RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ASAP3Q8TDY4 903 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 ARNTL2Q8WYA1 636 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 EPSTI1Q96J88 318 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 ZNF558Q96NG5 402 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 RPS6KC1Q96S38 1066 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 TCHPQ9BT92 498 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 CCDC94Q9BW85 323 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-220ENST00000505005 TTYH1Q9H313 450 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-220ENST00000505005 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 RC3H2Q9HBD1 1191 aaKnown RBP10.83□□□□□ -0.68
NR1I3-220ENST00000505005 ARHGAP28Q9P2N2 729 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 COG5Q9UP83 839 aa10.83□□□□□ -0.68
NR1I3-220ENST00000505005 A0A1W2PQ27 194 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 A0A1W2PQ64 194 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 A0A1W2PQD8 194 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 INPPL1O15357 1258 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 CLDN3O15551 220 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 MGEA5O60502 916 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 TOM1L1O75674 476 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 LDHAP00338 332 aaKnown RBP10.82□□□□□ -0.68
NR1I3-220ENST00000505005 ARF4P18085 180 aaPredicted RBP10.82□□□□□ -0.68
NR1I3-220ENST00000505005 NCKAP1LP55160 1127 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 PLCB3Q01970 1234 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
NR1I3-220ENST00000505005 GRIN2CQ14957 1233 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 NOMO2Q5JPE7 1267 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 ATF7IP2Q5U623 682 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 FAM173BQ6P4H8 233 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 CNNM4Q6P4Q7 775 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 ELMSAN1Q6PJG2 1045 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 MRPL38Q96DV4 380 aaKnown RBP10.82□□□□□ -0.68
NR1I3-220ENST00000505005 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
NR1I3-220ENST00000505005 NGRNQ9NPE2 291 aaKnown RBP10.82□□□□□ -0.68
NR1I3-220ENST00000505005 OLFML3Q9NRN5 406 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 SLC38A7Q9NVC3 462 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 SPG21Q9NZD8 308 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 DPP7Q9UHL4 492 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 GBF1Q92538 1859 aa10.82□□□□□ -0.68
NR1I3-220ENST00000505005 PVALEFA0A1B0GWK0 134 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 MCF2P10911 925 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 IGFBP4P22692 258 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 PSMD2Q13200 908 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 MCM6Q14566 821 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 RESP18Q5W5W9 173 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 PDXDC1Q6P996 788 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 HAUS6Q7Z4H7 955 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 GPR65Q8IYL9 337 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 THNSL1Q8IYQ7 743 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 LINC01599Q8WXQ3 324 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 DDX12PQ92771 950 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 BICD1Q96G01 975 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 TMEM169Q96HH4 297 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 ZNF668Q96K58 619 aaPredicted RBP10.81□□□□□ -0.68
NR1I3-220ENST00000505005 UROC1Q96N76 676 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 CASD1Q96PB1 797 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 RUSC1Q9BVN2 902 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 COLEC11Q9BWP8 271 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 CCDC113Q9H0I3 377 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 ZHX3Q9H4I2 956 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 PRDM12Q9H4Q4 367 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 MINDY3Q9H8M7 445 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 PLEKHA5Q9HAU0 1116 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 BLOC1S4Q9NUP1 217 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 KBTBD4Q9NVX7 518 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 CGNQ9P2M7 1197 aaKnown RBP10.81□□□□□ -0.68
NR1I3-220ENST00000505005 KCNH3Q9ULD8 1083 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 PCDHA7Q9UN72 937 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 FAM50BQ9Y247 325 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 IPPQ9Y573 584 aa10.81□□□□□ -0.68
NR1I3-220ENST00000505005 RANBP2P49792 3224 aaKnown RBP10.81□□□□□ -0.68
NR1I3-220ENST00000505005 ARHGEF37A1IGU5 675 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 CSDE1O75534 798 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 OFD1O75665 1012 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 C1RP00736 705 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 THP07101 528 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 SLFN14P0C7P3 912 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 MYOGP15173 224 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 MATR3P43243 847 aaKnown RBP eCLIP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 LIG4P49917 911 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 GTF2BQ00403 316 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 CREMQ03060 361 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 ELAVL2Q12926 359 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 GRIK3Q13003 919 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 AMHR2Q16671 573 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 TCTN1Q2MV58 587 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 HERC4Q5GLZ8 1057 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 FOXD4L5Q5VV16 416 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 KCNT2Q6UVM3 1135 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 MPZL3Q6UWV2 235 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 TMEM161BQ8NDZ6 487 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 LEO1Q8WVC0 666 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 FAM161BQ96MY7 647 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 GUCD1Q96NT3 240 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms