RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CRELD2Q6UXH1 353 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 EXOC8Q8IYI6 725 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 WNT8BQ93098 351 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 TRIM44Q96DX7 344 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 JPH2Q9BR39 696 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 NFKBIZQ9BYH8 718 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 FZD8Q9H461 694 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CDHR5Q9HBB8 845 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 PTPRHQ9HD43 1115 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 SIX2Q9NPC8 291 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 XPNPEP3Q9NQH7 507 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 HDAC6Q9UBN7 1215 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 ARMCX3Q9UH62 379 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 DDX20Q9UHI6 824 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 AJAP1Q9UKB5 411 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 EXOC7Q9UPT5 735 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CITO14578 2027 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 PTPRJQ12913 1337 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 NRCAMQ92823 1304 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 A0A087WZ62 844 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 A0A0B4J269 797 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 RRN3P2A6NIE6 340 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 MAPK13O15264 365 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 MEFVO15553 781 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 ASAP2O43150 1006 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 TREHO43280 583 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 EXOC3O60645 756 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 LRRN2O75325 713 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 GPR32O75388 356 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 AFPP02771 609 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 PRKCBP05771 671 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 ACTN1P12814 892 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 SCP2P22307 547 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 HOXD10P28358 340 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 LIG4P49917 911 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 EFNA5P52803 228 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 NLRP11P59045 1033 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 CHMP4BP1P59074 171 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 CYP24A1Q07973 514 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 TMEM62Q0P6H9 643 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 BFSP1Q12934 665 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 SNRNP35Q16560 246 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 DCAF17Q5H9S7 520 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 GNASQ5JWF2 1037 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 EEF1DP3Q658K8 133 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 ZSCAN30Q86W11 494 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 RETREG2Q8NC44 543 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 RAET1EQ8TD07 263 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 CPLX3Q8WVH0 158 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 POMGNT1Q8WZA1 660 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 BAP1Q92560 729 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 BICD1Q96G01 975 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 ACO2Q99798 780 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 FDXACB1Q9BRP7 624 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 CRACR2AQ9BSW2 395 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 MTG1Q9BT17 334 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 FAM49AQ9H0Q0 323 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 GANQ9H2C0 597 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 METTL14Q9HCE5 456 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 TOPORSQ9NS56 1045 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 AGPAT5Q9NUQ2 364 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 WBP1LQ9NX94 342 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 KCNG1Q9UIX4 513 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 FRMD4BQ9Y2L6 1034 aa7.53□□□□□ -1.2
TOPBP1-203ENST00000503464 CNTNAP2Q9UHC6 1331 aa7.52□□□□□ -1.2
TOPBP1-203ENST00000503464 SMIM35A0A1B0GVV1 85 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 A0A1W2PQJ5 194 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 C17orf102A2RUQ5 167 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 LRRIQ3A6PVS8 624 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ESPNB1AK53 854 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 AKR1B15C9JRZ8 316 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 INO80B-WBP1J3KQ70 363 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ACKR2O00590 384 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 EXTL3O43909 919 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TSPAN1O60635 241 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 KPNA6O60684 536 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ASGR1P07306 291 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 CYP2C9P11712 490 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SLC9A1P19634 815 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FGFR4P22455 802 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SFPQP23246 707 aaKnown RBP eCLIP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 PON1P27169 355 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ABCD1P33897 745 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TNFSF9P41273 254 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FMO5P49326 533 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ACOT2P49753 483 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 VAMP7P51809 220 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ATN1P54259 1190 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms