RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SYCE2Q6PIF2 218 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 CDR2LQ86X02 465 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 SUSD6Q92537 303 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 RPGRIP1Q96KN7 1286 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 S1PR5Q9H228 398 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 RNF39Q9H2S5 420 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 FAN1Q9Y2M0 1017 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 PRR33A8MZF0 331 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 ALDH2P05091 517 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 HOXB8P17481 243 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 U2AF2P26368 475 aaKnown RBP eCLIP21.54■■□□□ 1.043e-9■■■□□ 15
UBE2D3-215ENST00000503418 CCT6AP40227 531 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 CBX2Q14781 532 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 PADI6Q6TGC4 694 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 ZBTB8OSQ8IWT0 167 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 HACE1Q8IYU2 909 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 GAD1Q99259 594 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 TMEM175Q9BSA9 504 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 NXF3Q9H4D5 531 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 LRWD1Q9UFC0 647 aa21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 PRG3Q9Y2Y8 225 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-215ENST00000503418 ARL5CA6NH57 179 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 LOC730098B7Z3J9 87 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 NRP1O14786 923 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 NPTXRO95502 500 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 SSBP05455 408 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 FXR2P51116 673 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 SCNN1GP51170 649 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 GIT2Q14161 759 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 SLC27A1Q6PCB7 646 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 C4orf32Q8N8J7 132 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 ZFP42Q96MM3 310 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 VN1R3Q9BXE9 311 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 PRMT7Q9NVM4 692 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 KIF3AQ9Y496 699 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 PCDHB6Q9Y5E3 794 aa21.53■■□□□ 1.04
UBE2D3-215ENST00000503418 AKAP5P24588 427 aa21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 OR1G1P47890 313 aa21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 TOB1P50616 345 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 PTGDRQ13258 359 aa21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 TMEM132AQ24JP5 1023 aa21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 HERC4Q5GLZ8 1057 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 CDCA2Q69YH5 1023 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 MCTP1Q6DN14 999 aa21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 IRAK3Q9Y616 596 aa21.52■■□□□ 1.04
UBE2D3-215ENST00000503418 LIG1P18858 919 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 CYP11B2P19099 503 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 MUTP22033 750 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 SP100P23497 879 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 PTPN14Q15678 1187 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 ECM1Q16610 540 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 CES5AQ6NT32 575 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 COLGALT2Q8IYK4 626 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 SNX29Q8TEQ0 813 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 BSNDQ8WZ55 320 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 RAB34Q9BZG1 259 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 C2orf40Q9H1Z8 148 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 MIOSQ9NXC5 875 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 STK39Q9UEW8 545 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 PARP2Q9UGN5 583 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 CDH22Q9UJ99 828 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 KIAA1024Q9UPX6 916 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 GIT1Q9Y2X7 761 aa21.51■■□□□ 1.03
UBE2D3-215ENST00000503418 A0A1B0GUA9 196 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 EPCAMP16422 314 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 RARS2Q5T160 578 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 DEPTORQ8TB45 409 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 TMX3Q96JJ7 454 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 PRIMPOLQ96LW4 560 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 BHMT2Q9H2M3 363 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 POLD4Q9HCU8 107 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 DDX19AQ9NUU7 478 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 KLK14Q9P0G3 267 aa21.5■■□□□ 1.03
UBE2D3-215ENST00000503418 C2CD2LO14523 706 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 INPPL1O15357 1258 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 NR1I2O75469 434 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 CD2BP2O95400 341 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 ITIH3Q06033 890 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 PDIA5Q14554 519 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 MAPK6Q16659 721 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 C12orf76Q8N812 135 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 RPS6KC1Q96S38 1066 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 EMILIN2Q9BXX0 1053 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 ADAM7Q9H2U9 754 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 FZD8Q9H461 694 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 TSHZ2Q9NRE2 1034 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 MRPL17Q9NRX2 175 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 DZANK1Q9NVP4 752 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 MARCH5Q9NX47 278 aa21.49■■□□□ 1.03
UBE2D3-215ENST00000503418 SPDYE4A6NLX3 237 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 N4BP3O15049 544 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 PRKCBP05771 671 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 KLRC2P26717 231 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 GJB2P29033 226 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 NAMPTP43490 491 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 DSC1Q08554 894 aa21.48■■□□□ 1.03
UBE2D3-215ENST00000503418 PRPF4BQ13523 1007 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms