RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NOTUMQ6P988 496 aa18.04■□□□□ 0.48
SCLT1-204ENST00000503215 NACC1Q96RE7 527 aa18.04■□□□□ 0.48
SCLT1-204ENST00000503215 PCDHB6Q9Y5E3 794 aa18.04■□□□□ 0.48
SCLT1-204ENST00000503215 CNTNAP2Q9UHC6 1331 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 LRRIQ4A6NIV6 560 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 PRR33A8MZF0 331 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 NRP1O14786 923 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 ALDH2P05091 517 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 EPCAMP16422 314 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 AKAP5P24588 427 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 U2AF2P26368 475 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCLT1-204ENST00000503215 AXLP30530 894 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 MLH1P40692 756 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 GNL2Q13823 731 aaKnown RBP18.03■□□□□ 0.48
SCLT1-204ENST00000503215 CBX2Q14781 532 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-204ENST00000503215 IL17AQ16552 155 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 HERC4Q5GLZ8 1057 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-204ENST00000503215 PADI6Q6TGC4 694 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 TAS1R1Q7RTX1 841 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 COLGALT2Q8IYK4 626 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 GSTCDQ8NEC7 633 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 SLC22A17Q8WUG5 538 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 RSPH1Q8WYR4 309 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 NFKBIZQ9BYH8 718 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 MARCH5Q9NX47 278 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 KLK14Q9P0G3 267 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 FAN1Q9Y2M0 1017 aa18.03■□□□□ 0.48
SCLT1-204ENST00000503215 PRG3Q9Y2Y8 225 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-204ENST00000503215 TECTAO75443 2155 aa18.02■□□□□ 0.48
SCLT1-204ENST00000503215 NPTXRO95502 500 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 EDN1P05305 212 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 CYP11B2P19099 503 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 SCNN1GP51170 649 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 PTPN14Q15678 1187 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 CNNM3Q8NE01 707 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 CASP10Q92851 521 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 CCDC51Q96ER9 411 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 FAM193BQ96PV7 902 aaPredicted RBP18.02■□□□□ 0.47
SCLT1-204ENST00000503215 KANSL3Q9P2N6 904 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 CACNG4Q9UBN1 327 aa18.02■□□□□ 0.47
SCLT1-204ENST00000503215 A0A1B0GUA9 196 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 FSD2A1L4K1 749 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 PP2D1A8MPX8 630 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 INPPL1O15357 1258 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 LILRB3O75022 631 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 SRGAP2BP0DMP2 458 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 HOXB8P17481 243 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-204ENST00000503215 CCT6AP40227 531 aaKnown RBP18.01■□□□□ 0.47
SCLT1-204ENST00000503215 TRAPPC10P48553 1259 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCLT1-204ENST00000503215 DSC1Q08554 894 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 PTGDRQ13258 359 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 ORC2Q13416 577 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-204ENST00000503215 RABEP1Q15276 862 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 PCBP1Q15365 356 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCLT1-204ENST00000503215 MCPH1Q8NEM0 835 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 ERMNQ8TAM6 284 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 RABGGTAQ92696 567 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 TMX3Q96JJ7 454 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 TMEM175Q9BSA9 504 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 KIFC3Q9BVG8 833 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 CXCL16Q9H2A7 254 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 FZD8Q9H461 694 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 IRAK3Q9Y616 596 aa18.01■□□□□ 0.47
SCLT1-204ENST00000503215 ARHGEF35A5YM69 484 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 CNPP09543 421 aaKnown RBP18■□□□□ 0.47
SCLT1-204ENST00000503215 CDC25AP30304 524 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 NCBP1Q09161 790 aaKnown RBP18■□□□□ 0.47
SCLT1-204ENST00000503215 RARS2Q5T160 578 aaKnown RBP18■□□□□ 0.47
SCLT1-204ENST00000503215 CDCA2Q69YH5 1023 aaPredicted RBP18■□□□□ 0.47
SCLT1-204ENST00000503215 HFE2Q6ZVN8 426 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 KLHL5Q96PQ7 755 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 ADAM7Q9H2U9 754 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 POMKQ9H5K3 350 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 UBN1Q9NPG3 1134 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 LRWD1Q9UFC0 647 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 NOL7Q9UMY1 257 aaKnown RBP18■□□□□ 0.47
SCLT1-204ENST00000503215 KIAA1024Q9UPX6 916 aa18■□□□□ 0.47
SCLT1-204ENST00000503215 C2CD2LO14523 706 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 EFEMP2O95967 443 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 LIG1P18858 919 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 OR1G1P47890 313 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 BMS1Q14692 1282 aaKnown RBP17.99■□□□□ 0.47
SCLT1-204ENST00000503215 SLC27A1Q6PCB7 646 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 EDAQ92838 391 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 TRIM6Q9C030 488 aaPredicted RBP17.99■□□□□ 0.47
SCLT1-204ENST00000503215 BHMT2Q9H2M3 363 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 GIT1Q9Y2X7 761 aa17.99■□□□□ 0.47
SCLT1-204ENST00000503215 TPRNQ4KMQ1 711 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 EEF1DP3Q658K8 133 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 IGSF22Q8N9C0 903 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 B3GALT6Q96L58 329 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 CCDC113Q9H0I3 377 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 PDZD7Q9H5P4 517 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 TSHZ2Q9NRE2 1034 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 DDX19AQ9NUU7 478 aaKnown RBP17.98■□□□□ 0.47
SCLT1-204ENST00000503215 PARP2Q9UGN5 583 aa17.98■□□□□ 0.47
SCLT1-204ENST00000503215 HCN4Q9Y3Q4 1203 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms