RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 N4BP3O15049 544 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 FGFR1P11362 822 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 NMT1P30419 496 aaKnown RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 AFMP43652 599 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 SNW1Q13573 536 aaKnown RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 TPRNQ4KMQ1 711 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 KRBA2Q6ZNG9 492 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 ZNF720Q7Z2F6 126 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 CCDC65Q8IXS2 484 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 CMTR2Q8IYT2 770 aaKnown RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 CNNM3Q8NE01 707 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 MRPL4Q9BYD3 311 aaKnown RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 HOXA2O43364 376 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 PPP1R37O75864 691 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 IBSPP21815 317 aaPredicted RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 PROZP22891 400 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 ABCD1P33897 745 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 GATMP50440 423 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 EHHADHQ08426 723 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 STRN3Q13033 797 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 HERC4Q5GLZ8 1057 aaPredicted RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 CLLU1OSQ5K130 101 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 ATF7IP2Q5U623 682 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 EEF1DP3Q658K8 133 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 PPP2R2DQ66LE6 453 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 GRAMD1CQ8IYS0 662 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 TARS2Q9BW92 718 aaKnown RBP27.6■■■□□ 2.01
LSM6-202ENST00000502781 ZNF576Q9H609 170 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 TBX20Q9UMR3 447 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 IPPQ9Y573 584 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 MEIS3P2A8K0S8 358 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 ABLIM1O14639 778 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 MYL1P05976 194 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 LINC00271P0C7V0 271 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 CASP1P29466 404 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 ASIC1P78348 528 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 FAM160A1Q05DH4 1040 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 COASYQ13057 564 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 CUL4BQ13620 913 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 ZPBP2Q6X784 338 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 AGMOQ6ZNB7 445 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 UNC13DQ70J99 1090 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 PGBD4Q96DM1 585 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 CASD1Q96PB1 797 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 TMEM117Q9H0C3 514 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 BLZF1Q9H2G9 400 aa27.59■■■□□ 2.01
LSM6-202ENST00000502781 SZT2Q5T011 3432 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 PVALEFA0A1B0GWK0 134 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 GADD45BO75293 160 aaPredicted RBP27.58■■■□□ 2.01
LSM6-202ENST00000502781 PIGRP01833 764 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 MAP4K3Q8IVH8 894 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 RNF169Q8NCN4 708 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 RSPH1Q8WYR4 309 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 LPPQ93052 612 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 SEMA6BQ9H3T3 888 aa27.58■■■□□ 2.01
LSM6-202ENST00000502781 MRPL44Q9H9J2 332 aaKnown RBP27.58■■■□□ 2.01
LSM6-202ENST00000502781 NPTXRO95502 500 aa27.57■■■□□ 2
LSM6-202ENST00000502781 BTG3Q14201 252 aaPredicted RBP27.57■■■□□ 2
LSM6-202ENST00000502781 ZC2HC1CQ53FD0 456 aaPredicted RBP27.57■■■□□ 2
LSM6-202ENST00000502781 ZNF697Q5TEC3 545 aa27.57■■■□□ 2
LSM6-202ENST00000502781 CLP1Q92989 425 aaKnown RBP27.57■■■□□ 2
LSM6-202ENST00000502781 HVCN1Q96D96 273 aa27.57■■■□□ 2
LSM6-202ENST00000502781 TRIM6Q9C030 488 aaPredicted RBP27.57■■■□□ 2
LSM6-202ENST00000502781 RNF39Q9H2S5 420 aa27.57■■■□□ 2
LSM6-202ENST00000502781 NXF3Q9H4D5 531 aaKnown RBP27.57■■■□□ 2
LSM6-202ENST00000502781 GTPBP6O43824 516 aaPredicted RBP27.56■■■□□ 2
LSM6-202ENST00000502781 KLRC4O43908 158 aa27.56■■■□□ 2
LSM6-202ENST00000502781 TMEM132AQ24JP5 1023 aa27.56■■■□□ 2
LSM6-202ENST00000502781 SPRED2Q7Z698 418 aa27.56■■■□□ 2
LSM6-202ENST00000502781 FIBCD1Q8N539 461 aa27.56■■■□□ 2
LSM6-202ENST00000502781 ADPGKQ9BRR6 497 aa27.56■■■□□ 2
LSM6-202ENST00000502781 FGFBP2Q9BYJ0 223 aa27.56■■■□□ 2
LSM6-202ENST00000502781 TBC1D7Q9P0N9 293 aa27.56■■■□□ 2
LSM6-202ENST00000502781 HES2Q9Y543 173 aa27.56■■■□□ 2
LSM6-202ENST00000502781 CHD9Q3L8U1 2897 aa27.55■■■□□ 2
LSM6-202ENST00000502781 TBKBP1A7MCY6 615 aa27.55■■■□□ 2
LSM6-202ENST00000502781 INPPL1O15357 1258 aa27.55■■■□□ 2
LSM6-202ENST00000502781 TOM1L1O75674 476 aa27.55■■■□□ 2
LSM6-202ENST00000502781 CASP5P51878 434 aa27.55■■■□□ 2
LSM6-202ENST00000502781 ERVK-21P61565 698 aa27.55■■■□□ 2
LSM6-202ENST00000502781 ALCAMQ13740 583 aa27.55■■■□□ 2
LSM6-202ENST00000502781 DCAF4L1Q3SXM0 396 aa27.55■■■□□ 2
LSM6-202ENST00000502781 CDT1Q9H211 546 aa27.55■■■□□ 2
LSM6-202ENST00000502781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.54■■■□□ 2
LSM6-202ENST00000502781 OFD1O75665 1012 aa27.54■■■□□ 2
LSM6-202ENST00000502781 ITGA4P13612 1032 aa27.54■■■□□ 2
LSM6-202ENST00000502781 PAN2Q504Q3 1202 aaKnown RBP27.54■■■□□ 2
LSM6-202ENST00000502781 MPZL3Q6UWV2 235 aa27.54■■■□□ 2
LSM6-202ENST00000502781 HELQQ8TDG4 1101 aa27.54■■■□□ 2
LSM6-202ENST00000502781 TIGD1Q96MW7 591 aa27.54■■■□□ 2
LSM6-202ENST00000502781 TGS1Q96RS0 853 aaKnown RBP27.54■■■□□ 2
LSM6-202ENST00000502781 RSAD1Q9HA92 442 aa27.54■■■□□ 2
LSM6-202ENST00000502781 UBN1Q9NPG3 1134 aa27.54■■■□□ 2
LSM6-202ENST00000502781 PCDHB13Q9Y5F0 798 aa27.54■■■□□ 2
LSM6-202ENST00000502781 MRPL42Q9Y6G3 142 aaKnown RBP27.54■■■□□ 2
LSM6-202ENST00000502781 ZMYM2Q9UBW7 1377 aa27.53■■■□□ 2
LSM6-202ENST00000502781 UBE2HP62256 183 aa27.53■■■□□ 2
LSM6-202ENST00000502781 DPYDQ12882 1025 aa27.53■■■□□ 2
LSM6-202ENST00000502781 FAM26FQ5R3K3 315 aa27.53■■■□□ 2
LSM6-202ENST00000502781 KANK3Q6NY19 840 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms