RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 CATSPER3Q86XQ3 398 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 SMG8Q8ND04 991 aaKnown RBP13.16□□□□□ -0.3
CDK7-202ENST00000502604 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 RPGRIP1Q96KN7 1286 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
CDK7-202ENST00000502604 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
CDK7-202ENST00000502604 GPRC5CQ9NQ84 441 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 HES2Q9Y543 173 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 IPPQ9Y573 584 aa13.16□□□□□ -0.3
CDK7-202ENST00000502604 PLXNA3P51805 1871 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 CLASP2O75122 1294 aaKnown RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 POMCP01189 267 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 NBR1Q14596 966 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 CBX2Q14781 532 aaPredicted RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 HERC4Q5GLZ8 1057 aaPredicted RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 FBXO18Q8NFZ0 1043 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 FOXP1Q9H334 677 aaPredicted RBP13.15□□□□□ -0.3
CDK7-202ENST00000502604 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 TRIP11Q15643 1979 aa13.15□□□□□ -0.3
CDK7-202ENST00000502604 MYO15AQ9UKN7 3530 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 ZDBF2Q9HCK1 2354 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 B4GALT5O43286 388 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 CTSAP10619 480 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
CDK7-202ENST00000502604 SP100P23497 879 aaPredicted RBP13.14□□□□□ -0.31
CDK7-202ENST00000502604 PLA2G5P39877 138 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 MLH1P40692 756 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 POU5F1BQ06416 359 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 TTC38Q5R3I4 469 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
CDK7-202ENST00000502604 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
CDK7-202ENST00000502604 CASP10Q92851 521 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
CDK7-202ENST00000502604 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
CDK7-202ENST00000502604 ARL5CA6NH57 179 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 LRRIQ4A6NIV6 560 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK7-202ENST00000502604 ITGA4P13612 1032 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
CDK7-202ENST00000502604 AXLP30530 894 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
CDK7-202ENST00000502604 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK7-202ENST00000502604 HFE2Q6ZVN8 426 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 NOSTRINQ8IVI9 506 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 FEZF2Q8TBJ5 459 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 ZFP42Q96MM3 310 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
CDK7-202ENST00000502604 GAD1Q99259 594 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
CDK7-202ENST00000502604 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 DMDP11532 3685 aa13.13□□□□□ -0.31
CDK7-202ENST00000502604 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 H3BQV1 296 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 NRP1O14786 923 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDK7-202ENST00000502604 WEE2P0C1S8 567 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 EPCAMP16422 314 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 RPA1P27694 616 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 SCNN1GP51170 649 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 GNL2Q13823 731 aaKnown RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 ECM1Q16610 540 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 KANK3Q6NY19 840 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 FAM122AQ96E09 287 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 TRIM6Q9C030 488 aaPredicted RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 MYH11P35749 1972 aa13.12□□□□□ -0.31
CDK7-202ENST00000502604 MTCL1Q9Y4B5 1905 aaKnown RBP13.12□□□□□ -0.31
CDK7-202ENST00000502604 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 F8W810 466 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 INPPL1O15357 1258 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 NPTXRO95502 500 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 ALDH2P05091 517 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 AKAP5P24588 427 aa13.11□□□□□ -0.31
CDK7-202ENST00000502604 ORC2Q13416 577 aaPredicted RBP13.11□□□□□ -0.31
CDK7-202ENST00000502604 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms