RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 DDX25Q9UHL0 483 aaKnown RBP16.39■□□□□ 0.21
SEC61A1-207ENST00000498837 CEP250Q9BV73 2442 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 EFEMP2O95967 443 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 ADH1AP07327 375 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 OR1G1P47890 313 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 INF2Q27J81 1249 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 KIAA0319Q5VV43 1072 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 MOXD1Q6UVY6 613 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 ERMP1Q7Z2K6 904 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 RNF168Q8IYW5 571 aaPredicted RBP16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 SLC44A3Q8N4M1 653 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 PSPC1Q8WXF1 523 aaKnown RBP16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 VAV3Q9UKW4 847 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 CA14Q9ULX7 337 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 CLUHO75153 1309 aa16.38■□□□□ 0.21
SEC61A1-207ENST00000498837 VWA8A3KMH1 1905 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 NOTCH4Q99466 2003 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 GLUD1P00367 558 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 ITGA4P13612 1032 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 GLUD2P49448 558 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 PPP2R5CQ13362 524 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 TOB2Q14106 344 aaPredicted RBP16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 NONOQ15233 471 aaKnown RBP eCLIP16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 PALB2Q86YC2 1186 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 RNF149Q8NC42 400 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 SMG7Q92540 1137 aaKnown RBP16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 ZNF707Q96C28 371 aaPredicted RBP16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 GAD1Q99259 594 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 LARP6Q9BRS8 491 aaKnown RBP16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 RXFP1Q9HBX9 757 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 EPS15L1Q9UBC2 864 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 HES2Q9Y543 173 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 IPPQ9Y573 584 aa16.37■□□□□ 0.21
SEC61A1-207ENST00000498837 ARL5CA6NH57 179 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 ZBTB39O15060 712 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 DEXIO95424 95 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 DSG1Q02413 1049 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 DSC1Q08554 894 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 POTEGQ6S5H5 508 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 KCNG4Q8TDN1 519 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 RIN2Q8WYP3 895 aaPredicted RBP16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 STAMQ92783 540 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 CPB2Q96IY4 423 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 B3GALT6Q96L58 329 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 RHOBTB2Q9BYZ6 727 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 TBC1D17Q9HA65 648 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 KCNMB3Q9NPA1 279 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 KCNJ14Q9UNX9 436 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 SSX2IPQ9Y2D8 614 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 R4GN57 208 aa16.36■□□□□ 0.21
SEC61A1-207ENST00000498837 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 DKC1O60832 514 aaKnown RBP eCLIP16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 SRFP11831 508 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 MLH1P40692 756 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 RFC5P40937 340 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 SCNN1GP51170 649 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 EMC2Q15006 297 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 CYP26C1Q6V0L0 522 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 C4orf19Q8IY42 314 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 EXOC8Q8IYI6 725 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 CNNM3Q8NE01 707 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 GPR152Q8TDT2 470 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 TCP11Q8WWU5 503 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 FAM20AQ96MK3 541 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 APOL6Q9BWW8 343 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 UBN1Q9NPG3 1134 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 RGL1Q9NZL6 768 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 DPP7Q9UHL4 492 aa16.35■□□□□ 0.21
SEC61A1-207ENST00000498837 COL4A3Q01955 1670 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 ASAP2O43150 1006 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 GAS2O43903 313 aaKnown RBP16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 TSPAN1O60635 241 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 ERLIN2O94905 339 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 DCNP07585 359 aaKnown RBP16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 RFX1P22670 979 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 PSMA5P28066 241 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 YWHABP31946 246 aaKnown RBP16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 EPHA7Q15375 998 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 XKR9Q5GH70 373 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 SPECC1Q5M775 1068 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 ELMSAN1Q6PJG2 1045 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 KRT25Q7Z3Z0 450 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 RABGGTAQ92696 567 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 HAS1Q92839 578 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 LXNQ9BS40 222 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 GPR62Q9BZJ7 368 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms