RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CNNM3Q8NE01 707 aa15.59■□□□□ 0.09
CCDC58-207ENST00000498466 PRPF31Q8WWY3 499 aaKnown RBP15.59■□□□□ 0.09
CCDC58-207ENST00000498466 PSPC1Q8WXF1 523 aaKnown RBP15.59■□□□□ 0.09
CCDC58-207ENST00000498466 ZNF707Q96C28 371 aaPredicted RBP15.59■□□□□ 0.09
CCDC58-207ENST00000498466 RNF26Q9BY78 433 aaPredicted RBP15.59■□□□□ 0.09
CCDC58-207ENST00000498466 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
CCDC58-207ENST00000498466 MINDY3Q9H8M7 445 aa15.59■□□□□ 0.09
CCDC58-207ENST00000498466 RXFP1Q9HBX9 757 aa15.59■□□□□ 0.09
CCDC58-207ENST00000498466 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCDC58-207ENST00000498466 NID2Q14112 1375 aa15.59■□□□□ 0.09
CCDC58-207ENST00000498466 WDR81Q562E7 1941 aa15.58■□□□□ 0.09
CCDC58-207ENST00000498466 GAS2O43903 313 aaKnown RBP15.58■□□□□ 0.08
CCDC58-207ENST00000498466 NR1I2O75469 434 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 LAMP2P13473 410 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 NPEPPSP55786 919 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
CCDC58-207ENST00000498466 DSG1Q02413 1049 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 DCLK2Q8N568 766 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 ST13P5Q8NFI4 369 aaPredicted RBP15.58■□□□□ 0.08
CCDC58-207ENST00000498466 HDAC7Q8WUI4 952 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 TMEM143Q96AN5 459 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 CEP170P1Q96L14 293 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 NT5C3AQ9H0P0 336 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 PLEKHA4Q9H4M7 779 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
CCDC58-207ENST00000498466 DLGAP2Q9P1A6 1054 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 NUMBLQ9Y6R0 609 aa15.58■□□□□ 0.08
CCDC58-207ENST00000498466 CYP3A7-CYP3A51PA0A087WV96 503 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 ARL5CA6NH57 179 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 F8W810 466 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 TGM5O43548 720 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 ERLIN2O94905 339 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 CYP3A7P24462 503 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 MLH1P40692 756 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 QARSP47897 775 aaKnown RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 LAMTOR4Q0VGL1 99 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 HTR4Q13639 388 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 NTRK3Q16288 839 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 GLYCTKQ8IVS8 523 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 EXOC8Q8IYI6 725 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 RNF168Q8IYW5 571 aaPredicted RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 ZNF579Q8NAF0 562 aaKnown RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 SMG8Q8ND04 991 aaKnown RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 PJA1Q8NG27 643 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 ETNPPLQ8TBG4 499 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 JAKMIP1Q96N16 626 aaKnown RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 GAD1Q99259 594 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 FOXQ1Q9C009 403 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 SLKQ9H2G2 1235 aaPredicted RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 SH3GLB2Q9NR46 395 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 SLC2A4RGQ9NR83 387 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 ZDHHC7Q9NXF8 308 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 IPPQ9Y573 584 aa15.57■□□□□ 0.08
CCDC58-207ENST00000498466 EP300Q09472 2414 aaPredicted RBP15.57■□□□□ 0.08
CCDC58-207ENST00000498466 ANHXE9PGG2 379 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 EML1O00423 815 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 DKC1O60832 514 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCDC58-207ENST00000498466 EFEMP2O95967 443 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 IFNAR1P17181 557 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 SCNN1GP51170 649 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 B3GALT6Q96L58 329 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 ZFP42Q96MM3 310 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 COLEC11Q9BWP8 271 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 EIF2AQ9BY44 585 aaKnown RBP15.56■□□□□ 0.08
CCDC58-207ENST00000498466 PRKD2Q9BZL6 878 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 DHX33Q9H6R0 707 aaKnown RBP15.56■□□□□ 0.08
CCDC58-207ENST00000498466 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCDC58-207ENST00000498466 CHST7Q9NS84 486 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 DLL3Q9NYJ7 618 aa15.56■□□□□ 0.08
CCDC58-207ENST00000498466 DDX25Q9UHL0 483 aaKnown RBP15.56■□□□□ 0.08
CCDC58-207ENST00000498466 POTEMA6NI47 508 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 KINO60870 393 aaKnown RBP15.55■□□□□ 0.08
CCDC58-207ENST00000498466 PAPLNO95428 1278 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 C1RP00736 705 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 GLULP15104 373 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 RFC5P40937 340 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 CCT2P78371 535 aaKnown RBP15.55■□□□□ 0.08
CCDC58-207ENST00000498466 DSC1Q08554 894 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 NCBP1Q09161 790 aaKnown RBP15.55■□□□□ 0.08
CCDC58-207ENST00000498466 USP41Q3LFD5 358 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 BMP2KLQ5H9B9 411 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 NOTUMQ6P988 496 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 POTEGQ6S5H5 508 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 TCP11Q8WWU5 503 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 SHDQ96IW2 340 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 APOL6Q9BWW8 343 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 NCOA5Q9HCD5 579 aaKnown RBP15.55■□□□□ 0.08
CCDC58-207ENST00000498466 MIOSQ9NXC5 875 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 HES2Q9Y543 173 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 PPME1Q9Y570 386 aa15.55■□□□□ 0.08
CCDC58-207ENST00000498466 ASAP2O43150 1006 aa15.54■□□□□ 0.08
CCDC58-207ENST00000498466 TSPAN1O60635 241 aa15.54■□□□□ 0.08
CCDC58-207ENST00000498466 LRRN2O75325 713 aa15.54■□□□□ 0.08
CCDC58-207ENST00000498466 P4HBP07237 508 aaKnown RBP15.54■□□□□ 0.08
CCDC58-207ENST00000498466 RPL17P18621 184 aaKnown RBP15.54■□□□□ 0.08
CCDC58-207ENST00000498466 FSHRP23945 695 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms