RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TGM5O43548 720 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 ERLIN2O94905 339 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 FSHRP23945 695 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 MLH1P40692 756 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 ATXN1P54253 815 aaKnown RBP13.06□□□□□ -0.32
CDK9-205ENST00000498339 MLF2Q15773 248 aaPredicted RBP13.06□□□□□ -0.32
CDK9-205ENST00000498339 ZNF528Q3MIS6 628 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 GPR161Q8N6U8 529 aaKnown RBP13.06□□□□□ -0.32
CDK9-205ENST00000498339 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 RDM1Q8NG50 284 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 SLC7A3Q8WY07 619 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 B3GALT6Q96L58 329 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 ESYT1Q9BSJ8 1104 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
CDK9-205ENST00000498339 ZDHHC7Q9NXF8 308 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
CDK9-205ENST00000498339 ZFHX4Q86UP3 3567 aa13.06□□□□□ -0.32
CDK9-205ENST00000498339 RALGAPA1Q6GYQ0 2036 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 IGKV6-21A0A0C4DH24 114 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 KANSL1LA0AUZ9 987 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 ANHXE9PGG2 379 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 MAFO75444 373 aaPredicted RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 SRGAP2CP0DJJ0 459 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 ADD1P35611 737 aaKnown RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 STARD6P59095 220 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 GPC5P78333 572 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 DSG1Q02413 1049 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 LMNB2Q03252 620 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 ST3GAL2Q16842 350 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 DHX32Q7L7V1 743 aaKnown RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 MRPL10Q7Z7H8 261 aaKnown RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 MAML2Q8IZL2 1156 aaPredicted RBP13.05□□□□□ -0.32
CDK9-205ENST00000498339 HDAC7Q8WUI4 952 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 SLC5A5Q92911 643 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 COLEC11Q9BWP8 271 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 PRKD2Q9BZL6 878 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 RXFP1Q9HBX9 757 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDK9-205ENST00000498339 FBXO4Q9UKT5 387 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 POLIQ9UNA4 740 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 PCDHGA2Q9Y5H1 932 aa13.05□□□□□ -0.32
CDK9-205ENST00000498339 KMT2BQ9UMN6 2715 aaPredicted RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 PRR5-ARHGAP8B1AHC4 643 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 F8W810 466 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 RPL17P18621 184 aaKnown RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 SCNN1GP51170 649 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 ARHGAP8P85298 464 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 CREMQ03060 361 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 FUT10Q6P4F1 479 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 PARM1Q6UWI2 310 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 PSPC1Q8WXF1 523 aaKnown RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 FGF14Q92915 247 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 CEP89Q96ST8 783 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 GAD1Q99259 594 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 TRIM6Q9C030 488 aaPredicted RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 GMEB2Q9UKD1 530 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 CDH7Q9ULB5 785 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 IPPQ9Y573 584 aa13.04□□□□□ -0.32
CDK9-205ENST00000498339 ZFP37Q9Y6Q3 630 aaPredicted RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 TPRP12270 2363 aaKnown RBP13.04□□□□□ -0.32
CDK9-205ENST00000498339 DCDC2BA2VCK2 349 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 ZMYND10O75800 440 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 PSMD10O75832 226 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 CD72P21854 359 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 KCNA4P22459 653 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 PSMC5P62195 406 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 NTHL1P78549 312 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 PRKCQQ04759 706 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 USP41Q3LFD5 358 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
CDK9-205ENST00000498339 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 BORCS6Q96GS4 357 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 KXD1Q9BQD3 176 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 RTKNQ9BST9 563 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
CDK9-205ENST00000498339 MINDY3Q9H8M7 445 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 ZSCAN32Q9NX65 697 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 VPS54Q9P1Q0 977 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms