RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MFAP3LO75121 409 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 ALDH1A2O94788 518 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 FKBP9O95302 570 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 ADH4P08319 380 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 PTTG1IPP53801 180 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 MANFP55145 182 aaKnown RBP4.49□□□□□ -1.69
PSPC1-205ENST00000497722 NPEPPSP55786 919 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 TMPRSS15P98073 1019 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 DHCR24Q15392 516 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 PTPROQ16827 1216 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 FAM214AQ32MH5 1076 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 LRCH2Q5VUJ6 765 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 FKBP9P1Q75LS8 142 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 RNF180Q86T96 592 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 CXorf67Q86X51 503 aaPredicted RBP4.49□□□□□ -1.69
PSPC1-205ENST00000497722 DNAJC10Q8IXB1 793 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 RPUSD2Q8IZ73 545 aaKnown RBP4.49□□□□□ -1.69
PSPC1-205ENST00000497722 MSL3Q8N5Y2 521 aaKnown RBP4.49□□□□□ -1.69
PSPC1-205ENST00000497722 ATXN2LQ8WWM7 1075 aaKnown RBP4.49□□□□□ -1.69
PSPC1-205ENST00000497722 AGAP2Q99490 1192 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 PRDM12Q9H4Q4 367 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 KCNG1Q9UIX4 513 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 COL4A3BPQ9Y5P4 624 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 PPP2R3BQ9Y5P8 575 aa4.49□□□□□ -1.69
PSPC1-205ENST00000497722 GOLGA6L6A8MZA4 724 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 ZEB2O60315 1214 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 BRINP1O60477 761 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 IPO13O94829 963 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 LSP1P33241 339 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 IGBP1P78318 339 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 MRPL49Q13405 166 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 TRIM25Q14258 630 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 CSRP2Q16527 193 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 DDB1Q16531 1140 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 GPRIN1Q7Z2K8 1008 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 OR52N2Q8NGI0 321 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 WDR66Q8TBY9 1149 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 GAB3Q8WWW8 586 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 PRRX2Q99811 253 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 LSM14BQ9BX40 385 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 CPEB1Q9BZB8 566 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 WNT8AQ9H1J5 351 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 EMC7Q9NPA0 242 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 APOBEC2Q9Y235 224 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 NOC2LQ9Y3T9 749 aaKnown RBP4.48□□□□□ -1.69
PSPC1-205ENST00000497722 HS3ST4Q9Y661 456 aa4.48□□□□□ -1.69
PSPC1-205ENST00000497722 A0A087X1B8 175 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 ST20-MTHFSA0A0A6YYL1 179 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 NRP1O14786 923 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 FOXN1O15353 648 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 FAM20BO75063 409 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 ULK1O75385 1050 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 BPIP17213 487 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 CASRP41180 1078 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 WNT3AP56704 352 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 FRMD7Q6ZUT3 714 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 DOK3Q7L591 496 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 LILRA3Q8N6C8 439 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-205ENST00000497722 MB21D1Q8N884 522 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 SLC25A43Q8WUT9 341 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-205ENST00000497722 RSAD2Q8WXG1 361 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 FERMT2Q96AC1 680 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 ARL8AQ96BM9 186 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 PGBD4Q96DM1 585 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 NCDNQ9UBB6 729 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 EVLQ9UI08 416 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-205ENST00000497722 PRSS50Q9UI38 385 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 DMRT1Q9Y5R6 373 aa4.47□□□□□ -1.69
PSPC1-205ENST00000497722 NEMP1O14524 444 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 TMEM127O75204 238 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 GNAT2P19087 354 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 FAM50AQ14320 339 aaKnown RBP4.46□□□□□ -1.7
PSPC1-205ENST00000497722 UBE3CQ15386 1083 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 BROXQ5VW32 411 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 STRA8Q7Z7C7 330 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 MRGPRGQ86SM5 289 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 RASSF3Q86WH2 238 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 ZNF276Q8N554 614 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 USP18Q9UMW8 372 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 FZD1Q9UP38 647 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 ATP8A1Q9Y2Q0 1164 aa4.46□□□□□ -1.7
PSPC1-205ENST00000497722 REXO2Q9Y3B8 237 aaKnown RBP4.46□□□□□ -1.7
PSPC1-205ENST00000497722 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.45□□□□□ -1.7
PSPC1-205ENST00000497722 AHRRA9YTQ3 701 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 TRIM24O15164 1050 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 NRP2O60462 931 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 RPS6KA4O75676 772 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 VIL1P09327 827 aaKnown RBP4.45□□□□□ -1.7
PSPC1-205ENST00000497722 HK1P19367 917 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 PROZP22891 400 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 PTGS2P35354 604 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 ID4P47928 161 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 GZMKP49863 264 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 STAT4Q14765 748 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 PDCD1Q15116 288 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 VPS72Q15906 364 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 C19orf54Q5BKX5 351 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 PITRM1Q5JRX3 1037 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 RNF219Q5W0B1 726 aaPredicted RBP4.45□□□□□ -1.7
PSPC1-205ENST00000497722 BTNL9Q6UXG8 535 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms