RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 SENP7Q9BQF6 1050 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 KATNAL1Q9BW62 490 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 MTIF3Q9H2K0 278 aaKnown RBP6.32□□□□□ -1.4
UBE3C-208ENST00000497368 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 AGO3Q9H9G7 860 aaKnown RBP6.32□□□□□ -1.4
UBE3C-208ENST00000497368 TPSG1Q9NRR2 321 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 SETD4Q9NVD3 440 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 SALL4Q9UJQ4 1053 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 ZNF318Q5VUA4 2279 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 MYO15AQ9UKN7 3530 aa6.32□□□□□ -1.4
UBE3C-208ENST00000497368 IGKV6D-21A0A0A0MT36 114 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 C17orf102A2RUQ5 167 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 B4DLN1 442 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 EREGO14944 169 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 DHX15O43143 795 aaKnown RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 TNFRSF21O75509 655 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 STAM2O75886 525 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 ARP10275 920 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 THPOP40225 353 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 MRPL12P52815 198 aaKnown RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 SP4Q02446 784 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 TRDNQ13061 729 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 LPIN1Q14693 890 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 NPY5RQ15761 445 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 NTRK3Q16288 839 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 UTP14CQ5TAP6 766 aaKnown RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 FAM117BQ6P1L5 589 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 RPAINQ86UA6 219 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 GJD3Q8N144 294 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 FANCBQ8NB91 859 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 CTCFLQ8NI51 663 aaPredicted RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 LENG9Q96B70 501 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 GPRASP2Q96D09 838 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 AGXT2Q9BYV1 514 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 FTOQ9C0B1 505 aaKnown RBP eCLIP6.31□□□□□ -1.4
UBE3C-208ENST00000497368 JADE2Q9NQC1 790 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 MTUS1Q9ULD2 1270 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 PCDHA6Q9UN73 950 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 SNX14Q9Y5W7 946 aa6.31□□□□□ -1.4
UBE3C-208ENST00000497368 ABHD14A-ACY1A0A1B0GW23 586 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 ERICH2A1L162 156 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 RSPH10B2B2RC85 870 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 FAM86B1E9PN63 330 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 MGEA5O60502 916 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 DTNBO60941 627 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 PHACTR2O75167 634 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 FAM86B2P0C5J1 330 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 RSPH10BP0C881 870 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 GHRP10912 638 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 ACTN1P12814 892 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 MARK3P27448 753 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 SREBF1P36956 1147 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 GATMP50440 423 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 ARHGAP4P98171 946 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 NRG1Q02297 640 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 APOBRQ0VD83 1088 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 CAMK1Q14012 370 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 SART3Q15020 963 aaKnown RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 PLCB4Q15147 1175 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 GNPTABQ3T906 1256 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 FBXO47Q5MNV8 452 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 XRRA1Q6P2D8 792 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 KCNV1Q6PIU1 500 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 CASC1Q6TDU7 716 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 CENPQQ7L2Z9 268 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 HEATR3Q7Z4Q2 680 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 RTN4RL1Q86UN2 441 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 CCDC60Q8IWA6 550 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 LINC01465Q8N7H1 131 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 SMARCC2Q8TAQ2 1214 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 RASGRP4Q8TDF6 673 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 SNX29Q8TEQ0 813 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 ATP6V0A1Q93050 837 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 ZNF689Q96CS4 500 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 UHRF1Q96T88 793 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 POP1Q99575 1024 aaKnown RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 RAD9AQ99638 391 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 MLXIPQ9HAP2 919 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 AGO4Q9HCK5 861 aaKnown RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 RIC8AQ9NPQ8 531 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 SH2B1Q9NRF2 756 aaPredicted RBP6.3□□□□□ -1.4
UBE3C-208ENST00000497368 PPME1Q9Y570 386 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 PLXNA3P51805 1871 aa6.3□□□□□ -1.4
UBE3C-208ENST00000497368 C2orf16Q68DN1 1984 aa6.29□□□□□ -1.4
UBE3C-208ENST00000497368 USP34Q70CQ2 3546 aa6.29□□□□□ -1.4
UBE3C-208ENST00000497368 NFASCO94856 1347 aa6.29□□□□□ -1.4
UBE3C-208ENST00000497368 IGSF9BQ9UPX0 1349 aa6.29□□□□□ -1.4
UBE3C-208ENST00000497368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.29□□□□□ -1.4
UBE3C-208ENST00000497368 KLF18A0A0U1RQI7 1052 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms