RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 NOL10Q9BSC4 688 aaKnown RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 KCTD10Q9H3F6 313 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 AGO3Q9H9G7 860 aaKnown RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 NOB1Q9ULX3 412 aaKnown RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 SYNPO2Q9UMS6 1093 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 EDARQ9UNE0 448 aa5.25□□□□□ -1.57
SMC4-225ENST00000497203 ZFR2Q9UPR6 939 aaKnown RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 RBM8AQ9Y5S9 174 aaKnown RBP5.25□□□□□ -1.57
SMC4-225ENST00000497203 SLC26A4O43511 780 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 LPLP06858 475 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 ZNF20P17024 532 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 XPAP23025 273 aaPredicted RBP5.24□□□□□ -1.57
SMC4-225ENST00000497203 AKAP5P24588 427 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 ADCY7P51828 1080 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 ADKP55263 362 aaKnown RBP5.24□□□□□ -1.57
SMC4-225ENST00000497203 LGALS4P56470 323 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 TBX4P57082 545 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 SAFB2Q14151 953 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMC4-225ENST00000497203 ODF1Q14990 250 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 MINDY4Q4G0A6 757 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 CCSAPQ6IQ19 270 aaPredicted RBP5.24□□□□□ -1.57
SMC4-225ENST00000497203 CLEC14AQ86T13 490 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 CCAR1Q8IX12 1150 aaKnown RBP5.24□□□□□ -1.57
SMC4-225ENST00000497203 MIER2Q8N344 545 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMC4-225ENST00000497203 TTC8Q8TAM2 541 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 SLC7A6OSQ96CW6 309 aaPredicted RBP5.24□□□□□ -1.57
SMC4-225ENST00000497203 PAWRQ96IZ0 340 aaKnown RBP5.24□□□□□ -1.57
SMC4-225ENST00000497203 HIST1H2AHQ96KK5 128 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 AIFM3Q96NN9 605 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 OR14A2Q96R54 314 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 HIST1H2AJQ99878 128 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 PRDM12Q9H4Q4 367 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 IFT122Q9HBG6 1241 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMC4-225ENST00000497203 DPP7Q9UHL4 492 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 TMPRSS11EQ9UL52 423 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 ZBTB21Q9ULJ3 1066 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 PCDHB6Q9Y5E3 794 aa5.24□□□□□ -1.57
SMC4-225ENST00000497203 CAND2O75155 1236 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 RAD17O75943 681 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 OSMP13725 252 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 HSPA6P17066 643 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 SLC16A1P53985 500 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 NRG3P56975 720 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 ADAM8P78325 824 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 PPARAQ07869 468 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 TCIRG1Q13488 830 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 ZXDCQ2QGD7 858 aaPredicted RBP5.23□□□□□ -1.57
SMC4-225ENST00000497203 ZNF585AQ6P3V2 769 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 LYSMD2Q8IV50 215 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 SHCBP1Q8NEM2 672 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 GCDHQ92947 438 aaPredicted RBP5.23□□□□□ -1.57
SMC4-225ENST00000497203 LPPQ93052 612 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 FATE1Q969F0 183 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 CLIP3Q96DZ5 547 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 GPHA2Q96T91 129 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 C1QTNF3Q9BXJ4 246 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 PRSS50Q9UI38 385 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 USP18Q9UMW8 372 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 CDY2AQ9Y6F7 541 aa5.23□□□□□ -1.57
SMC4-225ENST00000497203 NDUFS2O75306 463 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 BPIFB4P59827 614 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 RIN1Q13671 783 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 CDSNQ15517 529 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 C14orf80Q86SX3 495 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 TPH2Q8IWU9 490 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 ANKRD53Q8N9V6 530 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 PLA2G15Q8NCC3 412 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 GAB3Q8WWW8 586 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 RABGGTAQ92696 567 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 DVL3Q92997 716 aaPredicted RBP5.22□□□□□ -1.57
SMC4-225ENST00000497203 RPL10LQ96L21 214 aaKnown RBP5.22□□□□□ -1.57
SMC4-225ENST00000497203 FDXACB1Q9BRP7 624 aaPredicted RBP5.22□□□□□ -1.57
SMC4-225ENST00000497203 ACE2Q9BYF1 805 aaPredicted RBP5.22□□□□□ -1.57
SMC4-225ENST00000497203 KLC2Q9H0B6 622 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 SLC6A15Q9H2J7 730 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 DEF6Q9H4E7 631 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 NMRK2Q9NPI5 230 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 PRDM11Q9NQV5 511 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 SAP30BPQ9UHR5 308 aaKnown RBP5.22□□□□□ -1.57
SMC4-225ENST00000497203 RCAN3Q9UKA8 241 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 SLC30A1Q9Y6M5 507 aa5.22□□□□□ -1.57
SMC4-225ENST00000497203 CCDC194A0A1B0GVG4 234 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 PMS2P1A4D2B8 440 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 ERC2O15083 957 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 TOX4O94842 621 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 ZRANB2O95218 330 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMC4-225ENST00000497203 GAAP10253 952 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 C5AR1P21730 350 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 RPS19P39019 145 aaKnown RBP5.21□□□□□ -1.58
SMC4-225ENST00000497203 SELENOPP49908 381 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 CDK17Q00537 523 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 FOXL1Q12952 345 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 TRIM25Q14258 630 aaKnown RBP5.21□□□□□ -1.58
SMC4-225ENST00000497203 R3HDM1Q15032 1099 aaKnown RBP5.21□□□□□ -1.58
SMC4-225ENST00000497203 MAN2A1Q16706 1144 aa5.21□□□□□ -1.58
SMC4-225ENST00000497203 RRP12Q5JTH9 1297 aaKnown RBP5.21□□□□□ -1.58
SMC4-225ENST00000497203 GJC2Q5T442 439 aaPredicted RBP5.21□□□□□ -1.58
SMC4-225ENST00000497203 IFIT1BQ5T764 474 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms