RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 A0A0G2JLL6 359 aaPredicted RBP5.85□□□□□ -1.47
CSMD3-208ENST00000497026 A0A1B0GTL3 188 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 C7orf72A4D263 438 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 OTOL1A6NHN0 477 aaPredicted RBP5.85□□□□□ -1.47
CSMD3-208ENST00000497026 NOP56O00567 594 aaKnown RBP5.85□□□□□ -1.47
CSMD3-208ENST00000497026 TBX1O43435 398 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 HMMRO75330 724 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 THBDP07204 575 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 UQCRFS1P1P0C7P4 283 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 IGFBP6P24592 240 aaPredicted RBP5.85□□□□□ -1.47
CSMD3-208ENST00000497026 MAP2K2P36507 400 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 ETFBP38117 255 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 TERF1P54274 439 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 RHBDL3P58872 404 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 MECOMQ03112 1051 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 NOGQ13253 232 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 TNFAIP1Q13829 316 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 TTC39AQ5SRH9 613 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 FKBP1CQ5VVH2 108 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 GTF2IRD2BQ6EKJ0 949 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 GTF2IRD2Q86UP8 949 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 ERC1Q8IUD2 1116 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 ZGPATQ8N5A5 531 aaKnown RBP5.85□□□□□ -1.47
CSMD3-208ENST00000497026 NSUN4Q96CB9 384 aaKnown RBP5.85□□□□□ -1.47
CSMD3-208ENST00000497026 MTA3Q9BTC8 594 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 MYH7P12883 1935 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 ATRNL1Q5VV63 1379 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 WDHD1O75717 1129 aaPredicted RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 PLA2G1BP04054 148 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 ASGR2P07307 311 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 HSPA8P11142 646 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 NF2P35240 595 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 BTDP43251 543 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 MRE11P49959 708 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 TARBP2Q15633 366 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 INF2Q27J81 1249 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 HSP90AB4PQ58FF6 505 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 CCDC158Q5M9N0 1113 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 GORABQ5T7V8 394 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 ADGRA1Q86SQ6 560 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 FAM83AQ86UY5 434 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 AACSQ86V21 672 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 CABP7Q86V35 215 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 ZFPM1Q8IX07 1006 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 TP53I13Q8NBR0 393 aaPredicted RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 MICAL1Q8TDZ2 1067 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 BTN2A2Q8WVV5 523 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 KIF1BPQ96EK5 621 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 CLMNQ96JQ2 1002 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 CHMP4BQ9H444 224 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 DDX4Q9NQI0 724 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 PIH1D3Q9NQM4 214 aaKnown RBP5.84□□□□□ -1.47
CSMD3-208ENST00000497026 ACTR10Q9NZ32 417 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 PRDM4Q9UKN5 801 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 FAN1Q9Y2M0 1017 aa5.84□□□□□ -1.47
CSMD3-208ENST00000497026 DOCK1Q14185 1865 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 GPR75-ASB3A0A0A6YYF3 556 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 FFAR3O14843 346 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 SMARCA5O60264 1052 aaPredicted RBP5.83□□□□□ -1.48
CSMD3-208ENST00000497026 NPHS1O60500 1241 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 NTRK1P04629 796 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 PTMSP20962 102 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 PMLP29590 882 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 MAP2K1Q02750 393 aaPredicted RBP5.83□□□□□ -1.48
CSMD3-208ENST00000497026 CYP4F3Q08477 520 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 TCP10Q12799 353 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 NCAPHQ15003 741 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 SUPT20HL1Q3ZLR7 823 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 SV2CQ496J9 727 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 UTP14CQ5TAP6 766 aaKnown RBP5.83□□□□□ -1.48
CSMD3-208ENST00000497026 ARMC9Q7Z3E5 817 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 TRIM59Q8IWR1 403 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 FAM178BQ8IXR5 827 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 CLASRPQ8N2M8 674 aaKnown RBP5.83□□□□□ -1.48
CSMD3-208ENST00000497026 FAM151AQ8WW52 585 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 DPF3Q92784 378 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 RELTQ969Z4 430 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 IDI2Q9BXS1 227 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 XYLT2Q9H1B5 865 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 DCTPP1Q9H773 170 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 USP40Q9NVE5 1235 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 TMOD2Q9NZR1 351 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 PHIPQ8WWQ0 1821 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 ATAD5Q96QE3 1844 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 COL2A1P02458 1487 aaPredicted RBP5.83□□□□□ -1.48
CSMD3-208ENST00000497026 PTPRFP10586 1907 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 NAV1Q8NEY1 1877 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 CASP8AP2Q9UKL3 1982 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 MYH1P12882 1939 aa5.83□□□□□ -1.48
CSMD3-208ENST00000497026 DDTLA6NHG4 134 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-208ENST00000497026 DDAH1O94760 285 aa5.82□□□□□ -1.48
CSMD3-208ENST00000497026 TCF3P15923 654 aa5.82□□□□□ -1.48
CSMD3-208ENST00000497026 ECI1P42126 302 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms