RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MLH1P40692 756 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
VTI1A-209ENST00000496445 CBX2Q14781 532 aaPredicted RBP15.84■□□□□ 0.13
VTI1A-209ENST00000496445 CDR2LQ86X02 465 aaPredicted RBP15.84■□□□□ 0.13
VTI1A-209ENST00000496445 RNF135Q8IUD6 432 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 CNNM3Q8NE01 707 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 MCPH1Q8NEM0 835 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 BSNDQ8WZ55 320 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 NACC1Q96RE7 527 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 APOL5Q9BWW9 433 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
VTI1A-209ENST00000496445 MUTYHQ9UIF7 546 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 TECTAO75443 2155 aa15.83■□□□□ 0.13
VTI1A-209ENST00000496445 CARNS1A5YM72 827 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 ARL5CA6NH57 179 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 PRR33A8MZF0 331 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 CTSAP10619 480 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 CA8P35219 290 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 PTPN14Q15678 1187 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 HERC4Q5GLZ8 1057 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-209ENST00000496445 ERMNQ8TAM6 284 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 CASP10Q92851 521 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 TMEM175Q9BSA9 504 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 PHF7Q9BWX1 381 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-209ENST00000496445 MARCH5Q9NX47 278 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 MIOSQ9NXC5 875 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.12
VTI1A-209ENST00000496445 PCDHB6Q9Y5E3 794 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 IRAK3Q9Y616 596 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 C2orf16Q68DN1 1984 aa15.83■□□□□ 0.12
VTI1A-209ENST00000496445 LRRIQ4A6NIV6 560 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 TTLL13PA6NNM8 815 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 CXCL14O95715 111 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 EDN1P05305 212 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 SCNN1GP51170 649 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 DSC1Q08554 894 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 HAUS3Q68CZ6 603 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 PADI6Q6TGC4 694 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 COLGALT2Q8IYK4 626 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 IGSF22Q8N9C0 903 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 ZFP42Q96MM3 310 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 GAD1Q99259 594 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 APOL6Q9BWW8 343 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 UBN1Q9NPG3 1134 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 KANSL3Q9P2N6 904 aa15.82■□□□□ 0.12
VTI1A-209ENST00000496445 A0A1B0GUA9 196 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 F8W810 466 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 NRP1O14786 923 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 ST18O60284 1047 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 NPTXRO95502 500 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 EPCAMP16422 314 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 MUTP22033 750 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 CCT6AP40227 531 aaKnown RBP15.81■□□□□ 0.12
VTI1A-209ENST00000496445 PTGDRQ13258 359 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 IL17AQ16552 155 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 ZNF318Q5VUA4 2279 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 SLC27A1Q6PCB7 646 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 GSTCDQ8NEC7 633 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 TMX3Q96JJ7 454 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 PRIMPOLQ96LW4 560 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 FAM193BQ96PV7 902 aaPredicted RBP15.81■□□□□ 0.12
VTI1A-209ENST00000496445 FZD8Q9H461 694 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 LRWD1Q9UFC0 647 aa15.81■□□□□ 0.12
VTI1A-209ENST00000496445 MUC6Q6W4X9 2439 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 MYO15AQ9UKN7 3530 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 ZMYM2Q9UBW7 1377 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 ARHGEF35A5YM69 484 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 PP2D1A8MPX8 630 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 EFEMP2O95967 443 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 HOXB8P17481 243 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 CYP11B2P19099 503 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 AKAP5P24588 427 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 NCBP1Q09161 790 aaKnown RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 FAM187BQ17R55 369 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 ZBTB8OSQ8IWT0 167 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 RNF168Q8IYW5 571 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 FEZF2Q8TBJ5 459 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 SLC22A17Q8WUG5 538 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 RPGRIP1Q96KN7 1286 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 CCDC113Q9H0I3 377 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 BHMT2Q9H2M3 363 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 PDZD7Q9H5P4 517 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 PRMT7Q9NVM4 692 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 FAN1Q9Y2M0 1017 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
VTI1A-209ENST00000496445 PRG3Q9Y2Y8 225 aaPredicted RBP15.8■□□□□ 0.12
VTI1A-209ENST00000496445 TRIP11Q15643 1979 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 LILRB3O75022 631 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 SOD2P04179 222 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 ALDH2P05091 517 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 SSBP05455 408 aaKnown RBP eCLIP15.79■□□□□ 0.12
VTI1A-209ENST00000496445 OR1G1P47890 313 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 GIT2Q14161 759 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 BMS1Q14692 1282 aaKnown RBP15.79■□□□□ 0.12
VTI1A-209ENST00000496445 TAS1R1Q7RTX1 841 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 C12orf76Q8N812 135 aaPredicted RBP15.79■□□□□ 0.12
VTI1A-209ENST00000496445 SNX29Q8TEQ0 813 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms