RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 EXOC7Q9UPT5 735 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 PCDHB7Q9Y5E2 793 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 GBF1Q92538 1859 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 C9IYK1 514 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 HNRNPDLO14979 420 aaKnown RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 HOXA2O43364 376 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 TLL1O43897 1013 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 NPTXRO95502 500 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 RPN1P04843 607 aaKnown RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 HOXA11P31270 313 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 LIG4P49917 911 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 SNW1Q13573 536 aaKnown RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 RAB30Q15771 203 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 DCAF4L1Q3SXM0 396 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 ZNF568Q3ZCX4 644 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 SLC27A1Q6PCB7 646 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 RTN4RL1Q86UN2 441 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-207ENST00000496202 ECHDC2Q86YB7 292 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 ABI1Q8IZP0 508 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 SYCP3Q8IZU3 236 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 PGBD4Q96DM1 585 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 ACCSQ96QU6 501 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 YME1L1Q96TA2 773 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 TCHPQ9BT92 498 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 PDZD7Q9H5P4 517 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 FAM105AQ9NUU6 356 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 ANKFY1Q9P2R3 1169 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 MSRAQ9UJ68 235 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 TBX20Q9UMR3 447 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 PCDHB2Q9Y5E7 798 aa10.61□□□□□ -0.71
PRPF3-207ENST00000496202 CITO14578 2027 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 A0A0U1RQF3 1178 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 A0A1B0GUA9 196 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 GJB5O95377 273 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 MYBP10242 640 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 HARSP12081 509 aaKnown RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 GTF2BQ00403 316 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 DPYDQ12882 1025 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 PSMD2Q13200 908 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 PNOCQ13519 176 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 ZC2HC1CQ53FD0 456 aaPredicted RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 L1TD1Q5T7N2 865 aaKnown RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 NT5DC1Q5TFE4 455 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 MPZL3Q6UWV2 235 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 ZPBP2Q6X784 338 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TAS1R3Q7RTX0 852 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TMCO2Q7Z6W1 182 aaPredicted RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 CDR2LQ86X02 465 aaPredicted RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 SMARCE1Q969G3 411 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TOP1MTQ969P6 601 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 FIZ1Q96SL8 496 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 ACO2Q99798 780 aaKnown RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TARS2Q9BW92 718 aaKnown RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TRAIPQ9BWF2 469 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 APOL6Q9BWW8 343 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 ST6GALNAC4Q9H4F1 302 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 ELAC1Q9H777 363 aaKnown RBP10.6□□□□□ -0.71
PRPF3-207ENST00000496202 LMBRD1Q9NUN5 540 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 RMND1Q9NWS8 449 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TMEM161AQ9NX61 479 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 TNFSF13BQ9Y275 285 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 USP20Q9Y2K6 914 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 INSL6Q9Y581 213 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 PCDHA11Q9Y5I1 949 aa10.6□□□□□ -0.71
PRPF3-207ENST00000496202 UBE4BO95155 1302 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 GRXCR1A8MXD5 290 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 EIF3DO15371 548 aaKnown RBP eCLIP10.59□□□□□ -0.71
PRPF3-207ENST00000496202 CLDN3O15551 220 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 KLRC4O43908 158 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 TOM1L1O75674 476 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 EOMESO95936 686 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 MBD3O95983 291 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 EDN1P05305 212 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 ITGA4P13612 1032 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 CASP5P51878 434 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 RABGGTBP53611 331 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 FAM189BP81408 668 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 SMAD3P84022 425 aaKnown RBP10.59□□□□□ -0.71
PRPF3-207ENST00000496202 NOLC1Q14978 699 aaKnown RBP eCLIP10.59□□□□□ -0.71
PRPF3-207ENST00000496202 LRIT3Q3SXY7 679 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 UBXN11Q5T124 520 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 FAM109BQ6ICB4 259 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-207ENST00000496202 GLB1LQ6UWU2 654 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 ZBTB33Q86T24 672 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 KCNN1Q92952 543 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 HPS3Q969F9 1004 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 RAD9AQ99638 391 aa10.59□□□□□ -0.71
PRPF3-207ENST00000496202 CCDC94Q9BW85 323 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-207ENST00000496202 EIF2AQ9BY44 585 aaKnown RBP10.59□□□□□ -0.71
PRPF3-207ENST00000496202 GTPBP4Q9BZE4 634 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms