RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 RFFLQ8WZ73 363 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 ZNF560Q96MR9 790 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 DIS3Q9Y2L1 958 aaKnown RBP12.45□□□□□ -0.42
COL25A1-204ENST00000494183 PFASO15067 1338 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 GOLGA8MH3BSY2 632 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 SLC37A4O43826 429 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 KRT7P08729 469 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 CLTAP09496 248 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 IFT88Q13099 833 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 NME3Q13232 169 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 MMEL1Q495T6 779 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 CFAP61Q8NHU2 1237 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 PDCD6IPQ8WUM4 868 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 TRIM56Q9BRZ2 755 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 TARS2Q9BW92 718 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 RIMS1Q86UR5 1692 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 PXDNQ92626 1479 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 MSH4O15457 936 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 SLC9A1P19634 815 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 EDRF1Q3B7T1 1238 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 TRIM72Q6ZMU5 477 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 CDR2LQ86X02 465 aaPredicted RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 AGPAT1Q99943 283 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 DHX35Q9H5Z1 703 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 KCND2Q9NZV8 630 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 SLC8A2Q9UPR5 921 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 ICAM1P05362 532 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 KRT10P13645 584 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 LIG3P49916 1009 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 NCOA4Q13772 614 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 RCN2Q14257 317 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 TSNAXIP1Q2TAA8 658 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 TRIM59Q8IWR1 403 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 RHOT1Q8IXI2 618 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 SLC30A5Q8TAD4 765 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 PARD3BQ8TEW8 1205 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 AFG1LQ8WV93 481 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 TNIP3Q96KP6 325 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 APEX2Q9UBZ4 518 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 BCAP29Q9UHQ4 241 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 FIS1Q9Y3D6 152 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
COL25A1-204ENST00000494183 CYP2C9P11712 490 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 VCXQ9H320 206 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 ERAP1Q9NZ08 941 aa12.44□□□□□ -0.42
COL25A1-204ENST00000494183 PIK3R2O00459 728 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 SART1O43290 800 aaKnown RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 S100BP04271 92 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 EIF3BP55884 814 aaKnown RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 BACE1P56817 501 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 GLE1Q53GS7 698 aaKnown RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 RAB44Q7Z6P3 723 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 CCDC197Q8NCU1 140 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 SPON2Q9BUD6 331 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 IP6K2Q9UHH9 426 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 BCL9O00512 1426 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 TOM1L1O75674 476 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 ARL4CP56559 192 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 TGFB2P61812 414 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 SEC23AQ15436 765 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 SH2D4BQ5SQS7 431 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 ALS2CLQ60I27 953 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 JADE1Q6IE81 842 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 EFCAB12Q6NXP0 572 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 LMNTD2Q8IXW0 634 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 GPBP1L1Q9HC44 474 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 CDH6P55285 790 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 RBP5P82980 135 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 C18orf8Q96DM3 657 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 STK33Q9BYT3 514 aa12.43□□□□□ -0.42
COL25A1-204ENST00000494183 PRDM5Q9NQX1 630 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-204ENST00000494183 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 CLGNO14967 610 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 SLC16A3O15427 465 aaKnown RBP12.42□□□□□ -0.42
COL25A1-204ENST00000494183 BAG2O95816 211 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 KRT3P12035 628 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 NR1D1P20393 614 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 RECQLP46063 649 aaPredicted RBP12.42□□□□□ -0.42
COL25A1-204ENST00000494183 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 ERO1BQ86YB8 467 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 EPC1Q9H2F5 836 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 EVI5O60447 810 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 HP1BP3Q5SSJ5 553 aaPredicted RBP12.42□□□□□ -0.42
COL25A1-204ENST00000494183 ELMSAN1Q6PJG2 1045 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 TRIM42Q8IWZ5 723 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
COL25A1-204ENST00000494183 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms