RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 BAIAP3O94812 1187 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 GARTP22102 1010 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 ERCC5P28715 1186 aaPredicted RBP16.32■□□□□ 0.2
ACTB-213ENST00000493945 PRCPP42785 496 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 CASP5P51878 434 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 MYBPC2Q14324 1141 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 LTBP2Q14767 1821 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 ISM2Q6H9L7 571 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 KLHL10Q6JEL2 608 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 ADSSL1Q8N142 457 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 TMEM40Q8WWA1 233 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 POMGNT1Q8WZA1 660 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 HPS3Q969F9 1004 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 TRIM43Q96BQ3 446 aaPredicted RBP16.32■□□□□ 0.2
ACTB-213ENST00000493945 SCLYQ96I15 445 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 MINDY3Q9H8M7 445 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 IL23AQ9NPF7 189 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 DNAH12Q6ZR08 3092 aa16.32■□□□□ 0.2
ACTB-213ENST00000493945 UMODL1Q5DID0 1318 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 ABHD14A-ACY1A0A1B0GW23 586 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 MCF2P10911 925 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 ARF4P18085 180 aaPredicted RBP16.31■□□□□ 0.2
ACTB-213ENST00000493945 CCNE1P24864 410 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 KCNJ6P48051 423 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 SMYD4Q8IYR2 804 aaPredicted RBP16.31■□□□□ 0.2
ACTB-213ENST00000493945 NELFBQ8WX92 580 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 P2RX5Q93086 422 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
ACTB-213ENST00000493945 MSTO1Q9BUK6 570 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
ACTB-213ENST00000493945 CDHR5Q9HBB8 845 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 TOPORSQ9NS56 1045 aaPredicted RBP16.31■□□□□ 0.2
ACTB-213ENST00000493945 RWDD2AQ9UIY3 292 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 FRMD4BQ9Y2L6 1034 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
ACTB-213ENST00000493945 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
ACTB-213ENST00000493945 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 CETN3O15182 167 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 HOXA2O43364 376 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 NBNO60934 754 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 STAG3L1P0CL83 205 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
ACTB-213ENST00000493945 FKBP3Q00688 224 aaKnown RBP16.3■□□□□ 0.2
ACTB-213ENST00000493945 NFIL3Q16649 462 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 AMHR2Q16671 573 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 NOC3LQ8WTT2 800 aaKnown RBP16.3■□□□□ 0.2
ACTB-213ENST00000493945 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
ACTB-213ENST00000493945 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 GZF1Q9H116 711 aaPredicted RBP16.3■□□□□ 0.2
ACTB-213ENST00000493945 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
ACTB-213ENST00000493945 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
ACTB-213ENST00000493945 MICAL3Q7RTP6 2002 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 SMTNL1A8MU46 457 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 BECN2A8MW95 431 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 CSDE1O75534 798 aaKnown RBP16.29■□□□□ 0.2
ACTB-213ENST00000493945 AMHP03971 560 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 CSF2RAP15509 400 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 FGFR4P22455 802 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
ACTB-213ENST00000493945 MCL1Q07820 350 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 MBTPS1Q14703 1052 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 LRSAM1Q6UWE0 723 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 SLC24A5Q71RS6 500 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 BADQ92934 168 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 CPB2Q96IY4 423 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 ADAM2Q99965 735 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 PDZD7Q9H5P4 517 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
ACTB-213ENST00000493945 AGPAT3Q9NRZ7 376 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
ACTB-213ENST00000493945 LRFN2Q9ULH4 789 aa16.29■□□□□ 0.2
ACTB-213ENST00000493945 ZMYM2Q9UBW7 1377 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 OGTO15294 1046 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 B4GALT5O43286 388 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 EXOC3O60645 756 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 GNA14O95837 355 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 FGBP02675 491 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 NR3C1P04150 777 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
ACTB-213ENST00000493945 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
ACTB-213ENST00000493945 NR2F2P24468 414 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 CENPPQ6IPU0 288 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms